CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.91170.1.S1_x_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 76.3 GmaAffx.91170.1.S1_x_at CF806895 - - 5e-58 At3g46060 ATRAB8A S.X. H.G.
0.67 86.1 GmaAffx.92555.1.S1_s_at CF808280 - - 2e-113 At5g20020 RAN2 S.X. H.G.
0.59 79.5 Gma.8031.1.S1_at BE823105 - - 4e-76 At4g12590 unknown protein S.X. H.G.
0.47 66.6 GmaAffx.14686.2.S1_s_at AW756251 - - 5e-24 At1g65650 UCH2 S.X. H.G.
0.33 46.1 Gma.16051.1.S1_at CD398111 - - 6e-25 At3g04780 - S.X. H.G.
0.31 42.2 GmaAffx.93620.1.S1_s_at CF809345 - - 3e-19 At3g61140 FUS6 (FUSCA 6) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.2 92.8 GSM294048 97_2249.2F.R268L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.2 92.8 GSM244818 1_SLO.M2W2.CEL, Experimental replicate 2 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.2 92.8 GSM293317 98_1206.1P.R127P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.2 92.8 GSM294476 42_3183.2K.R9K1L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.2 92.8 GSM293615 44_2051.2B.R038L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.2 92.8 GSM292841 20_1481.1L.R291L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.2 92.8 GSM294027 78_2265.2F.R123L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.1 92.3 GSM293442 31_1627.1R.R312L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.0 91.7 GSM294407 64_2449.2J.R161L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.0 91.7 GSM244816 19_V71.M2W4.CEL, Experimental replicate 4 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 993 GmaAffx.91170.1.S1_s_at CF806895 - - 5e-58 At3g46060 ATRAB8A C.G. S.X.
0.63 0 956 Gma.14354.1.S1_x_at AW755388 - - 3e-67 At3g53610 ATRAB8 C.G. S.X.
0.63 0 956 Gma.14354.1.S1_at AW755388 - - 3e-67 At3g53610 ATRAB8 C.G. S.X.
0.56 0 678 Gma.11282.1.S1_at AI443415 - - 2e-62 At3g53610 ATRAB8 C.G. S.X.
0.70 0 650 GmaAffx.93385.1.S1_x_at CF806095 - - 1e-68 At3g46060 ATRAB8A C.G. S.X.
0.70 0 650 GmaAffx.93385.1.S1_at CF806095 - - 1e-68 At3g46060 ATRAB8A C.G. S.X.
0.64 1e-173 609 Gma.14354.2.S1_at BI472159 - - 3e-53 At5g59840 Ras-related GTP-binding family protein C.G. S.X.
0.46 2e-86 319 Gma.5641.1.S1_at AW349077 - - 1e-82 At5g59840 Ras-related GTP-binding family protein C.G. S.X.
0.22 2e-49 196 GmaAffx.72129.1.S1_at BE806728 - - 1e-14 At3g53610 ATRAB8 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.68 5e-58 224 Arabidopsis thaliana At3g46060 823749 ATRAB8A small GTP-binding protein (ara-3) - - - C.G. S.X.
0.53 1e-66 252 Hordeum vulgare Contig3337_s_at Contig3337 - - 5e-50 At5g59840 Ras-related GTP-binding family protein C.G. S.X.
0.64 1e-35 151 Oryza sativa Os.12233.2.S1_x_at - - - 0 C.G. S.X.
0.63 6e-120 430 Populus trichocarpa Ptp.2072.2.S1_s_at CA931719 hypothetical protein - 6e-83 At3g46060 ATRAB8A C.G. S.X.
0.52 6e-39 161 Triticum aestivum Ta.6968.2.S1_a_at CA604796 - - 2e-33 At5g03520 ATRAB8C C.G. S.X.
0.55 6e-129 458 Vitis vinifera 1619471_at BQ794353 hypothetical protein LOC100243217 - 1e-112 At3g46060 ATRAB8A C.G. S.X.
0.46 1e-53 208 Zea mays Zm.6039.1.A1_at BG837895 - - 9e-65 At5g03520 ATRAB8C C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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