CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.91170.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 87.8 GmaAffx.91170.1.S1_s_at CF806895 - - 5e-58 At3g46060 ATRAB8A S.X. H.G.
0.63 82.9 Gma.2809.3.S1_at BG238208 - - 3e-16 At4g29160 SNF7.1 S.X. H.G.
0.61 81.8 Gma.11267.3.S1_a_at BI786263 - - 1e-7 At2g28370 - S.X. H.G.
0.57 78.8 GmaAffx.58407.2.S1_at AW307570 - - 1e-15 At3g50050 aspartyl protease family protein S.X. H.G.
0.57 78.8 GmaAffx.90152.1.S1_s_at CF805877 guanine nucleotide regulatory protein - 8e-144 At4g17170 RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C) S.X. H.G.
0.30 40.4 Gma.13243.1.S1_at AW277929 - - 8e-5 At1g16240 SYP51 (SYNTAXIN OF PLANTS 51) S.X. H.G.
0.16 19.7 GmaAffx.90621.1.S1_s_at CF806346 - - 4e-50 At2g21270 ubiquitin fusion degradation UFD1 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.9 97.1 GSM292890 65_C202.1L.R9L1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7 96.8 GSM292917 8_C216.1L.R9L3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1 95.8 GSM292208 70_C004.1A.R9A1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0 95.6 GSM292893 68_C210.1L.R9L2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.9 95.4 GSM292664 15_C173.1J.R9J2U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8 95.1 GSM293289 72_1238.1P.R145P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8 95.1 GSM292653 7_C156.1I.V7I2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8 95.1 GSM292825 82_C184.1K.R9K1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8 95.1 GSM292836 16_1473.1L.R287U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.7 94.8 GSM294114 6_3114.2G.SLG1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 993 GmaAffx.91170.1.S1_x_at CF806895 - - 5e-58 At3g46060 ATRAB8A C.G. S.X.
0.63 0 956 Gma.14354.1.S1_x_at AW755388 - - 3e-67 At3g53610 ATRAB8 C.G. S.X.
0.63 0 956 Gma.14354.1.S1_at AW755388 - - 3e-67 At3g53610 ATRAB8 C.G. S.X.
0.56 0 678 Gma.11282.1.S1_at AI443415 - - 2e-62 At3g53610 ATRAB8 C.G. S.X.
0.70 0 650 GmaAffx.93385.1.S1_x_at CF806095 - - 1e-68 At3g46060 ATRAB8A C.G. S.X.
0.70 0 650 GmaAffx.93385.1.S1_at CF806095 - - 1e-68 At3g46060 ATRAB8A C.G. S.X.
0.64 1e-173 609 Gma.14354.2.S1_at BI472159 - - 3e-53 At5g59840 Ras-related GTP-binding family protein C.G. S.X.
0.46 2e-86 319 Gma.5641.1.S1_at AW349077 - - 1e-82 At5g59840 Ras-related GTP-binding family protein C.G. S.X.
0.22 2e-49 196 GmaAffx.72129.1.S1_at BE806728 - - 1e-14 At3g53610 ATRAB8 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.68 5e-58 224 Arabidopsis thaliana At3g46060 823749 ATRAB8A small GTP-binding protein (ara-3) - - - C.G. S.X.
0.53 1e-66 252 Hordeum vulgare Contig3337_s_at Contig3337 - - 5e-50 At5g59840 Ras-related GTP-binding family protein C.G. S.X.
0.64 1e-35 151 Oryza sativa Os.12233.2.S1_x_at - - - 0 C.G. S.X.
0.63 6e-120 430 Populus trichocarpa Ptp.2072.2.S1_s_at CA931719 hypothetical protein - 6e-83 At3g46060 ATRAB8A C.G. S.X.
0.52 6e-39 161 Triticum aestivum Ta.6968.2.S1_a_at CA604796 - - 2e-33 At5g03520 ATRAB8C C.G. S.X.
0.55 6e-129 458 Vitis vinifera 1619471_at BQ794353 hypothetical protein LOC100243217 - 1e-112 At3g46060 ATRAB8A C.G. S.X.
0.46 1e-53 208 Zea mays Zm.6039.1.A1_at BG837895 - - 9e-65 At5g03520 ATRAB8C C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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