CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.91113.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 88.9 GmaAffx.91113.1.S1_s_at CF806834 - - 1e-31 At4g23460 beta-adaptin, putative S.X. H.G.
0.80 91.5 Gma.7528.2.S1_at BM891312 - - 3e-49 At4g16143 IMPA-2 (IMPORTIN ALPHA ISOFORM 2) S.X. H.G.
0.80 91.5 GmaAffx.29121.1.S1_at BU762958 - - 1e+0 At4g17310 unknown protein S.X. H.G.
0.73 88.9 GmaAffx.56889.1.S1_s_at AW781023 - - 3e-7 At3g59380 FTA (FARNESYLTRANSFERASE A) S.X. H.G.
0.67 86.1 GmaAffx.90621.1.S1_s_at CF806346 - - 4e-50 At2g21270 ubiquitin fusion degradation UFD1 family protein S.X. H.G.
0.40 57.1 GmaAffx.68394.1.S1_at BU082577 - - 3e+0 At5g03660 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.8 95.1 GSM292825 82_C184.1K.R9K1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6 94.5 GSM294130 84_2328.2G.R265P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6 94.5 GSM293663 88_2050.2B.R124P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5 94.2 GSM294073 2_2334.2G.R221P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5 94.2 GSM293377 62_1573.1Q.R160L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4 93.8 GSM293313 94_1237.1P.R145U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4 93.8 GSM292816 74_1424.1K.R261P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4 93.8 GSM292551 63_1298.1H.R188P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3 93.3 GSM293634 61_3026.2B.SLB2P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3 93.3 GSM292768 30_C198.1K.R9K3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1356 GmaAffx.91113.1.S1_at CF806834 - - 1e-31 At4g23460 beta-adaptin, putative C.G. S.X.
0.62 0 658 Gma.3836.1.S1_at BI317703 - - 1e-26 At4g23460 beta-adaptin, putative C.G. S.X.
0.27 2e-59 230 Gma.13303.1.A1_at CD390988 - - 2e-3 At4g11380 beta-adaptin, putative C.G. S.X.
0.03 1e-1 38 PsAffx.C129000037_at PsAffx.C129000037 - - 6e+0 At5g12320 ankyrin repeat family protein C.G. S.X.
0.04 1e-1 38 GmaAffx.45432.1.S1_at BG650794 - - 6e-1 At2g29525 - C.G. S.X.
0.01 5e-1 36 PsAffx.C621000001_at PsAffx.C621000001 - - 9e-2 At5g51195 unknown protein C.G. S.X.
0.03 5e-1 36 GmaAffx.32901.2.S1_at BU090282 - - 5e-2 At5g62500 ATEB1B (END BINDING PROTEIN 1B) C.G. S.X.
0.01 2e+0 34 PsAffx.C79000027_at PsAffx.C79000027 - - 3e+0 At2g06420 unknown protein C.G. S.X.
0.02 2e+0 34 HgAffx.16836.1.S1_at CB279520 - - 8e+0 At5g55450 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 1e-31 137 Arabidopsis thaliana At4g23460 828445 beta-adaptin, putative F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MFOPBA - - - C.G. S.X.
0.18 2e-16 85 Hordeum vulgare Contig6703_at Contig6703 - - 4e-108 At4g11380 beta-adaptin, putative C.G. S.X.
0.13 9e-25 115 Oryza sativa Os03g0355600 AK068938.1 - Adapter-related protein complex 1 beta 1 subunit(Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit)(Clathrin assembly protein complex 1 beta large chain).Splice isoform B 0 At4g23460 beta-adaptin, putative C.G. S.X.
0.46 7e-28 125 Populus trichocarpa PtpAffx.117024.1.S1_s_at CX168412 hypothetical protein - 7e-77 At4g11380 beta-adaptin, putative C.G. S.X.
0.11 4e-16 85 Triticum aestivum Ta.27318.1.S1_at BG908329 - - 2e-76 At4g11380 beta-adaptin, putative C.G. S.X.
0.21 9e-27 119 Vitis vinifera 1619414_at CF607341 hypothetical protein LOC100241708 - 1e-8 At4g23460 beta-adaptin, putative C.G. S.X.
0.13 2e-22 105 Zea mays Zm.12502.1.S1_at CF349170 - - 7e-83 At4g11380 beta-adaptin, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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