Gene omics information

Query gene ID	GmaAffx.91013.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.91013.1.S1_s_at	CF806738	-	-	5e+0	At5g51105	unknown protein	S.X.	H.G.	Please select
0.73	88.9	Gma.5491.1.S1_at	AW309940	-	-	1e+1	At5g51105	unknown protein	S.X.	H.G.	Please select
0.50	71.7	Gma.5491.2.S1_at	BF425401	-	-	3e+0	At5g59570	myb family transcription factor	S.X.	H.G.	Please select
0.36	50.8	Gma.11238.1.S1_at	BQ454110	-	-	3e-121	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	S.X.	H.G.	Please select
0.36	50.8	GmaAffx.90026.1.S1_s_at	CF805751	-	-	5e-18	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	S.X.	H.G.	Please select
0.33	46.1	Gma.6602.2.S1_s_at	BI320883	-	-	4e-103	At5g16440	IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.7	99.3	GSM293802	45_3067.2D.R9D3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.5	99.2	GSM292742	86_C167.1J.SLJ1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4	99.2	GSM244910	40_SLO.I3L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
9.4	99.2	GSM244806	17_CON.I3L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
9.3	99.2	GSM244934	9_SLO.I2W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
8.9	99.2	GSM244865	2_V71.I3L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
8.6	99.1	GSM244791	13_SLO.I2W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
7.8	99.0	GSM292814	72_C185.1K.SLK1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.5	98.9	GSM171621	15_Z.L.I.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.5	98.9	GSM292524	39_C137.1H.SLH2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	1229	GmaAffx.91013.1.S1_at	CF806738	-	-	5e+0	At5g51105	unknown protein	C.G.	S.X.	Please select
0.59	0	1027	Gma.5491.1.S1_at	AW309940	-	-	1e+1	At5g51105	unknown protein	C.G.	S.X.	Please select
0.29	7e-68	258	Gma.5491.2.S1_at	BF425401	-	-	3e+0	At5g59570	myb family transcription factor	C.G.	S.X.	Please select
0.29	7e-68	258	Gma.5491.2.S1_a_at	BF425401	-	-	3e+0	At5g59570	myb family transcription factor	C.G.	S.X.	Please select
0.29	7e-68	258	Gma.5491.2.S1_x_at	BF425401	-	-	3e+0	At5g59570	myb family transcription factor	C.G.	S.X.	Please select
0.24	2e-59	230	GmaAffx.90414.1.S1_at	CF806139	-	-	4e+0	At5g20500	glutaredoxin, putative	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C29000004_at	PsAffx.C29000004	-	-	5e-2	At1g22230	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C169000042_s_at	PsAffx.C169000042	-	-	4e-1	At1g06475	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C112000050_s_at	PsAffx.C112000050	-	-	2e-1	At5g54250	ATCNGC4 (CYCLIC NUCLEOTIDE-GATED CATION CHANNEL 4)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e+0	32	Arabidopsis thaliana	At5g51105	835184	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	3e-9	61	Hordeum vulgare	Contig11163_s_at	Contig11163	-	-	2e+0	At1g26800	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.05	2e-10	67	Oryza sativa	Os10g0576900	AK064038.1	-	Conserved hypothetical protein	6e-1	At5g58490	cinnamoyl-CoA reductase family	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.21	4e-20	99	Populus trichocarpa	PtpAffx.30128.1.S1_at	CV244941	hypothetical protein	-	3e+0	At2g23910	cinnamoyl-CoA reductase-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	6e-9	61	Triticum aestivum	Ta.10648.1.S1_x_at	BQ166184	-	-	2e-1	At4g30470	cinnamoyl-CoA reductase-related	C.G.	S.X.	Please select
0.19	2e-30	131	Vitis vinifera	1619065_at	CB972322	hypothetical protein LOC100253987	-	1e-2	At4g30470	cinnamoyl-CoA reductase-related	C.G.	S.X.	Please select
0.02	6e-1	34	Zea mays	Zm.16998.1.A1_at	CK347869	hypothetical protein LOC100193690	-	4e-1	At4g00840	zinc ion binding	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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