Gene omics information

Query gene ID	GmaAffx.90621.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.1	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	S.X.	H.G.	Please select
0.80	91.5	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	S.X.	H.G.	Please select
0.80	91.5	GmaAffx.29121.1.S1_at	BU762958	-	-	1e+0	At4g17310	unknown protein	S.X.	H.G.	Please select
0.73	88.9	GmaAffx.56889.1.S1_s_at	AW781023	-	-	3e-7	At3g59380	FTA (FARNESYLTRANSFERASE A)	S.X.	H.G.	Please select
0.73	88.9	GmaAffx.91113.1.S1_s_at	CF806834	-	-	1e-31	At4g23460	beta-adaptin, putative	S.X.	H.G.	Please select
0.40	57.1	GmaAffx.68394.1.S1_at	BU082577	-	-	3e+0	At5g03660	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.8	95.1	GSM293560	73_2004.2A.R270P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM293568	80_2032.2A.R152P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM294244	92_2340.2H.R202P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293307	89_1202.1P.R124P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM293072	72_1102.1N.R064P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM293412	94_C088.1Q.V7Q3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM292890	65_C202.1L.R9L1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM292959	38_C232.1M.R9M3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.1	92.3	GSM294236	85_3128.2H.SLH1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.1	92.3	GSM294237	86_3142.2H.SLH3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.60	0	1211	Gma.5658.1.S1_at	AW351312	-	-	5e-48	At2g21270	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please select
0.31	4e-35	149	GmaAffx.948.1.S1_at	BG155389	-	-	3e-3	At2g21270	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please select
0.33	1e-19	97	GmaAffx.90017.1.S1_at	CF805742	-	-	1e-24	At2g29070	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please select
0.16	5e-7	56	GmaAffx.77192.1.S1_s_at	BI701387	-	-	1e-15	At2g29070	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please select
0.03	1e-1	38	HgAffx.24219.1.S1_at	CB825133	-	-	2e+0	At1g56330	ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)	C.G.	S.X.	Please select
0.02	4e-1	36	PsAffx.C88000007_at	PsAffx.C88000007	-	-	3e+0	At5g48953	LCR86 (Low-molecular-weight cysteine-rich 86)	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C19000023_at	PsAffx.C19000023	-	-	1e+1	At5g63460	SAP domain-containing protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C184000008_at	PsAffx.C184000008	-	-	1e+0	At3g52790	peptidoglycan-binding LysM domain-containing protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C142000019_at	PsAffx.C142000019	-	-	2e-1	At3g62570	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.50	4e-50	198	Arabidopsis thaliana	At2g21270	816666	ubiquitin fusion degradation UFD1 family protein	F:molecular_function unknown;P:ubiquitin-dependent protein catabolic process;C:unknown;OFMPAB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.30	1e-17	89	Hordeum vulgare	Contig6821_at	Contig6821	-	-	8e-47	At2g21270	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please select
0.31	2e-13	77	Oryza sativa	Os02g0181800	AK121784.1	-	Ubiquitin fusion degradation protein 1 homolog (UBfusion protein 1). Splice isoform Short	5e-8	At4g38930	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.66	1e-103	377	Populus trichocarpa	PtpAffx.36701.1.S1_s_at	CF936040	hypothetical protein	-	1e-34	At2g21270	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.29	1e-19	97	Triticum aestivum	Ta.7484.1.A1_at	AY587885.1	ubiquitin fusion degradation protein	-	5e-27	At2g21270	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please select
0.14	2e-15	81	Vitis vinifera	1613706_at	CA808981	hypothetical protein LOC100258971	-	2e-15	At4g38930	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please select
0.30	3e-33	141	Zea mays	Zm.7574.1.A1_at	CO527472	ubiquitin fusion degradation protein 1	-	2e-16	At4g38930	ubiquitin fusion degradation UFD1 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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