Gene omics information

Query gene ID GmaAffx.90612.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.8GmaAffx.90612.1.S1_atCF806337--2e-14At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)S.X.H.G.
0.6786.1GmaAffx.83815.1.S1_s_atBG404904--1e+0At1g04330unknown proteinS.X.H.G.
0.5576.3GmaAffx.92005.1.S1_s_atCF807730epsilon2-COP-2e-21At2g34840coatomer protein epsilon subunit family protein / COPE family proteinS.X.H.G.
0.5071.7Gma.8155.1.S1_atBQ741444--6e-15At2g36680-S.X.H.G.
0.4463.3Gma.1305.1.S1_atCD411822--9e-2At5g39950ATTRX2 (THIOREDOXIN 2)S.X.H.G.
0.2329.9GmaAffx.50783.1.S1_atBM092102--1e+1At5g66590allergen V5/Tpx-1-related family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
85.7100.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
21.799.8GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
9.499.2GSM29223028_1045.1B.R025L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.399.2GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
7.498.9GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
5.698.3GSM29238660_1231.1F.R142U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.897.9GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
4.897.9GSM2921985_C008.1A.V7A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.697.7GSM29360131_2069.2B.R213L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.497.6GSM29377218_2164.2D.R027P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.940930GmaAffx.90612.1.S1_s_atCF806337--2e-14At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)C.G.S.X.
0.660862Gma.3028.1.S1_atCD410488--2e-9At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)C.G.S.X.
0.361e-96353Gma.18106.1.S1_atBM568226--1e+0At3g48590NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1)C.G.S.X.
0.281e-38161PsAffx.C115000005_atPsAffx.C115000005--3e-8At1g56170NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)C.G.S.X.
0.115e-1065PsAffx.CL1259Contig1_atPsAffx.CL1259Contig1--4e-7At1g08970NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)C.G.S.X.
0.031e-448GmaAffx.86595.1.S1_atBI315661--1e-8At1g56170NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)C.G.S.X.
0.033e-240GmaAffx.57725.1.S1_atBM885691--2e-2At2g45430DNA-binding protein-relatedC.G.S.X.
0.023e-240Gma.4584.1.S1_atBF009459--9e-3At1g44800nodulin MtN21 family proteinC.G.S.X.
0.033e-240Gma.17860.1.S1_atBU546053--6e-10At1g75540STH2 (SALT TOLERANCE HOMOLOG2)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.362e-1479Arabidopsis thalianaAt5g63470836466NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPFO---C.G.S.X.
0.221e-51202Hordeum vulgareContig1341_atContig1341--2e-9At1g08970NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)C.G.S.X.
0.296e-29129Oryza sativaOs09g0480700AK105156.1--1e-10At1g08970NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)C.G.S.X.
0.188e-961Populus trichocarpaPtp.2559.1.A1_a_atCV278989--9e-40At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)C.G.S.X.
0.253e-72272Triticum aestivumTa.22404.1.S1_atCK214953--2e-7At3g48590NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1)C.G.S.X.
0.033e-238Vitis vinifera1621100_atCF516844hypothetical protein LOC100262339-1e+0At5g64310AGP1 (ARABINOGALACTAN PROTEIN 1)C.G.S.X.
0.276e-47186Zea maysZm.6676.1.S1_atAW927976nuclear transcription factor Y subunit C-2-2e-3At1g08970NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage