Gene omics information

Query gene ID GmaAffx.9037.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8893.4GmaAffx.9037.1.S1_atBE822770--5e-1At2g37410ATTIM17-2S.X.H.G.
0.5878.8Gma.6669.1.S1_atAI960146--2e-13At5g63840RSW3 (RADIAL SWELLING 3)S.X.H.G.
0.5576.3Gma.9722.1.S1_atBE823732--5e-4At1g05720selenoprotein family proteinS.X.H.G.
0.4766.6Gma.2146.1.S1_atBQ610855--1e-39At1g50430DWF5 (DWARF 5)S.X.H.G.
0.4766.6GmaAffx.4125.1.S1_atBU545078--5e-1At3g52520unknown proteinS.X.H.G.
0.4766.6Gma.6439.1.S1_atBE659084--7e-34At3g53580diaminopimelate epimerase family proteinS.X.H.G.
0.4259.3Gma.8114.1.S1_atCD398562--4e-45At4g19210ATRLI2S.X.H.G.
0.4259.3Gma.16923.1.A1_s_atAI443575--5e-5At2g46505SDH4S.X.H.G.
0.4259.3GmaAffx.72806.1.S1_atBG651678--2e+0At5g47360pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.4057.1Gma.2150.1.S1_atCD401414--3e-21At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.499.4GSM209596resistant_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.999.4GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
8.799.1GSM201126Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
8.499.1GSM182033Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
8.399.1GSM191092Soybean_Cotyledon_SEED2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
8.299.0GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
7.498.9GSM182047Whole Seed at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
7.098.8GSM191090Soybean_Cotyledon_OI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
6.898.7GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
6.898.7GSM201127Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.530751GmaAffx.9037.2.S1_atBE657653--2e-3At2g37410ATTIM17-2C.G.S.X.
0.022e-138PsAffx.C15000059_atPsAffx.C15000059--2e+0At1g09245-C.G.S.X.
0.012e-138PsAffx.C100000035_atPsAffx.C100000035--2e+0At2g48120PAC (PALE CRESS)C.G.S.X.
0.022e-138GmaAffx.50116.1.S1_atBU544598--2e-15At3g60370immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinC.G.S.X.
0.032e-138Gma.3337.1.S1_atBQ298768--3e+0At5g07572unknown proteinC.G.S.X.
0.027e-136PsAffx.C54000100_atPsAffx.C54000100--8e+0At4g23710VAG2C.G.S.X.
0.017e-136PsAffx.C4000167_s_atPsAffx.C4000167--3e-1At3g61870unknown proteinC.G.S.X.
0.027e-136PsAffx.C31000075_atPsAffx.C31000075--2e+0At2g42060CHP-rich zinc finger protein, putativeC.G.S.X.
0.017e-136PsAffx.C284000003_atPsAffx.C284000003--4e-1At3g61870unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.055e-136Arabidopsis thalianaAt2g37410818317ATTIM17-2Mitochondrial inner membrane translocase. Together with AtTIM17-1, TIM17-2 has a long C-terminal extension not present in other TIMs. The extension is located in the outer membrane and so TIM17-2 links the inner and outer mitochondrial membranes. The C-terminal region is essential for protein import into mitochondria via the general import pathway but is not necessary for import via the carrier pathway.---C.G.S.X.
0.312e-78291Hordeum vulgareContig10300_atContig10300--4e-2At4g21740unknown proteinC.G.S.X.
0.282e-81303Oryza sativaOsAffx.5591.1.S1_at---0C.G.S.X.
0.229e-28125Populus trichocarpaPtpAffx.28432.1.S1_atCV241400--6e-7At2g37410ATTIM17-2C.G.S.X.
0.336e-87321Triticum aestivumTa.6865.1.S1_atCD902863--4e-2At4g21740unknown proteinC.G.S.X.
0.256e-47186Vitis vinifera1621567_atBQ793310hypothetical protein LOC100259466-1e-4At2g37410ATTIM17-2C.G.S.X.
0.155e-33141Zea maysZm.13937.1.S1_atAY108141.1mitochondrial import inner membrane translocase subunit Tim17-6e-1At2g37410ATTIM17-2C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage