Gene omics information

Query gene ID GmaAffx.90218.1.S1_at
Gene name SGT1-2
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.90218.1.S1_atCF805943SGT1-2-7e-12At4g11260SGT1BS.X.H.G.
0.7388.9GmaAffx.89982.1.A1_atCF807628--4e-29At2g18600RUB1-conjugating enzyme, putativeS.X.H.G.
0.6786.1GmaAffx.90695.1.S1_atCF806420Profilin, PRO2-6e-18At2g19760PRF1 (PROFILIN 1)S.X.H.G.
0.6382.9GmaAffx.89982.1.A1_s_atCF807628--4e-29At2g18600RUB1-conjugating enzyme, putativeS.X.H.G.
0.5071.7GmaAffx.91827.1.S1_atCF807552--1e-44At3g13920EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)S.X.H.G.
0.4463.3GmaAffx.92473.1.A1_atCF808198--1e+0At3g01360unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.999.8GSM29377218_2164.2D.R027P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.999.4GSM2922077-1011.1A.R007U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.598.9GSM29289267_1464.1L.R282P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.598.9GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.598.7GSM2934846_1597.1R.R015U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.098.5GSM2921985_C008.1A.V7A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.898.4GSM29287249_1469.1L.R285U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.698.3GSM2939115_2236.2E.R249P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.698.3GSM2934402_1598.1R.R015P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.398.2GSM2939004_2210.2E.R087P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.342e-71268GmaAffx.12243.1.A1_atCD406299SGT1-2-3e-7At4g11260SGT1BC.G.S.X.
0.262e-53208Gma.4629.1.A1_atCA820195SGT1-2-7e-12At4g11260SGT1BC.G.S.X.
0.112e-652GmaAffx.43947.1.S1_atBG508510--1e+1At5g57860ubiquitin family proteinC.G.S.X.
0.021e-136Gma.2119.1.S1_atBU081878--3e-40At5g03650SBE2.2 (starch branching enzyme 2.2)C.G.S.X.
0.016e-134PsAffx.C69000098_atPsAffx.C69000098--7e-2At1g08340rac GTPase activating protein, putativeC.G.S.X.
0.056e-134GmaAffx.44133.1.S1_atAW755933--1e-5At3g27930unknown proteinC.G.S.X.
0.056e-134GmaAffx.13300.1.S1_atBG155364--1e+1Atmg00150-C.G.S.X.
0.016e-134Gma.4893.1.S1_atAF049706.1aspartokinase-homoserine dehydrogenase-3e-85At4g19710bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putativeC.G.S.X.
0.036e-134Gma.2074.1.S1_atBQ297668--5e-7At2g39170unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.227e-1269Arabidopsis thalianaAt4g11260826728SGT1BFunctions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance.---C.G.S.X.
0.092e-754Hordeum vulgareContig4511_atContig4511SGT1 protein-1e-11At4g11260SGT1BC.G.S.X.
0.076e-1167Oryza sativaOs01g0624500AF192467.1-Sgt15e-14At4g11260SGT1BC.G.S.X.
0.492e-40165Populus trichocarpaPtpAffx.18719.3.A1_s_atCK093553--2e-17At4g23570SGT1AC.G.S.X.
0.121e-1685Triticum aestivumTa.2286.1.S1_atBJ308253SGT1-1 protein-6e-8At4g23570SGT1AC.G.S.X.
0.378e-43171Vitis vinifera1620695_atCF204841.1--3e-20At4g11260SGT1BC.G.S.X.
0.071e-1167Zea maysZm.5791.1.A1_atAY103953.1suppressor of G2 allele of SKP1-9e-7At4g23570SGT1AC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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