CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.90193.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 71.7 GmaAffx.90193.1.S1_s_at CF805918 - - 8e-21 At4g31170 protein kinase family protein S.X. H.G.
0.67 86.1 Gma.7674.1.A1_at BQ785403 - - 3e-36 At2g20130 LCV1 (LIKE COV 1) S.X. H.G.
0.67 86.1 Gma.3535.1.S1_s_at CD392670 - - 2e+0 At5g24650 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein S.X. H.G.
0.67 86.1 Gma.3535.2.S1_at BG047223 - - 2e+0 At2g21320 zinc finger (B-box type) family protein S.X. H.G.
0.67 86.1 Gma.3535.1.S1_x_at CD392670 - - 2e+0 At5g24650 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein S.X. H.G.
0.50 71.7 GmaAffx.90586.1.S1_s_at CF806311 - - 4e-16 At5g01960 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.3 96.2 GSM209594 resistant_12hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.1 95.8 GSM209597 susceptible_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.9 95.4 GSM209595 susceptible_12hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.8 95.1 GSM209598 resistant_48hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.8 95.1 GSM209599 susceptible_48hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.7 94.8 GSM209596 resistant_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.5 94.2 GSM293377 62_1573.1Q.R160L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5 94.2 GSM209585 resistant_12hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.5 94.2 GSM293381 66_C087.1Q.V7Q3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5 94.2 GSM309345 transgenic RNAiOleosin, biol rep 2, tech rep 1 GSE12300 Suppression of oleosin in soybean cotyledon
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.72 0 1065 GmaAffx.90193.1.A1_at CF806765 - - 8e-21 At4g31170 protein kinase family protein C.G. S.X.
0.02 9e-6 52 Gma.7650.1.S1_at BU549296 - - 6e-42 At2g17700 protein kinase family protein C.G. S.X.
0.08 1e-4 48 GmaAffx.75429.2.S1_at AW101897 - - 2e-29 At5g01850 protein kinase, putative C.G. S.X.
0.04 2e-3 44 GmaAffx.90391.1.S1_at CF806116 - - 1e-2 At2g22345 - C.G. S.X.
0.04 2e-3 44 GmaAffx.90249.1.S1_at CF805974 Aspartate aminotransferase glyoxysomal isozyme AAT1 precursor and aspartate aminotransferase cytosolic isozyme AAT2 (AAT) - 2e-52 At5g11520 ASP3 (ASPARTATE AMINOTRANSFERASE 3) C.G. S.X.
0.05 2e-3 44 GmaAffx.78789.1.S1_at BU082700 - - 7e-8 At3g01490 protein kinase, putative C.G. S.X.
0.04 2e-3 44 GmaAffx.74228.1.S1_at BM528600 - - 3e-41 At5g01850 protein kinase, putative C.G. S.X.
0.04 2e-3 44 GmaAffx.66041.2.S1_at AI522873 - - 2e-3 At5g01850 protein kinase, putative C.G. S.X.
0.04 2e-3 44 GmaAffx.20447.1.A1_at CD416498 - - 3e+0 At4g29870 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 8e-21 101 Arabidopsis thaliana At4g31170 829245 protein kinase family protein F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA - - - C.G. S.X.
0.21 2e-23 109 Hordeum vulgare Contig7810_at Contig7810 - - 7e-14 At2g24360 serine/threonine/tyrosine kinase, putative C.G. S.X.
0.23 4e-33 143 Oryza sativa Os04g0608900 AK111698.1 - Serine/threonine/tyrosine kinase 3e-10 At4g31170 protein kinase family protein C.G. S.X.
0.50 2e-49 196 Populus trichocarpa PtpAffx.249.256.S1_at CV238174 - - 4e-26 At2g24360 serine/threonine/tyrosine kinase, putative C.G. S.X.
0.27 2e-18 93 Triticum aestivum Ta.5648.2.S1_x_at CA645167 - - 2e-8 At2g24360 serine/threonine/tyrosine kinase, putative C.G. S.X.
0.40 1e-109 395 Vitis vinifera 1606734_at CB976622 hypothetical protein LOC100263908 - 1e-17 At2g24360 serine/threonine/tyrosine kinase, putative C.G. S.X.
0.27 5e-17 87 Zea mays Zm.1800.1.S1_at CD446335 serine/threonine protein kinase - 3e-7 At2g24360 serine/threonine/tyrosine kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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