CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.90168.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 71.7 GmaAffx.90168.1.S1_at CF805893 - - 5e-3 At2g36760 UGT73C2 (UDP-glucosyl transferase 73C2) S.X. H.G.
0.50 71.7 GmaAffx.74550.1.S1_s_at BU761480 - - 4e-3 At2g36760 UGT73C2 (UDP-glucosyl transferase 73C2) S.X. H.G.
0.20 25.1 GmaAffx.47228.1.S1_at BU761053 - - 6e-5 At4g20110 vacuolar sorting receptor, putative S.X. H.G.
0.16 19.7 Gma.16710.2.S1_a_at BM309321 mitogen-activated protein kinase kinase MAPKK2 - 6e-5 At4g29810 ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2) S.X. H.G.
0.14 17.5 GmaAffx.66744.1.S1_at AW703819 - - 1e-1 At1g53760 unknown protein S.X. H.G.
0.08 11.0 GmaAffx.88320.1.S1_at CA801881 - - 5e+0 At5g09490 40S ribosomal protein S15 (RPS15B) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.7 99.0 GSM292836 16_1473.1L.R287U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.4 98.6 GSM293313 94_1237.1P.R145U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7 97.8 GSM209591 mock_0hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.3 97.5 GSM293301 83_1157.1P.R098L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2 97.4 GSM293521 38_2003.2A.R270L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1 97.3 GSM293312 93_1157.1P.R098U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM293514 31_2013.2A.R203U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM293605 35_2091.2B.R298U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM293416 98_1565.1Q.R153U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM293350 38_1569.1Q.R157U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.78 0 860 GmaAffx.74550.1.S1_s_at BU761480 - - 4e-3 At2g36760 UGT73C2 (UDP-glucosyl transferase 73C2) C.G. S.X.
0.02 5e-1 36 Gma.6951.1.S1_at AW100450 - - 3e-12 At1g15340 MBD10 C.G. S.X.
0.01 2e+0 34 PsAffx.C55000028_at PsAffx.C55000028 - - 1e-1 At1g51110 plastid-lipid associated protein PAP / fibrillin family protein C.G. S.X.
0.01 2e+0 34 PsAffx.C48000001_at PsAffx.C48000001 - - 2e+0 At2g41225 unknown protein C.G. S.X.
0.01 2e+0 34 PsAffx.C144000025_at PsAffx.C144000025 - - 5e-1 At5g56650 ILL1 C.G. S.X.
0.03 2e+0 34 HgAffx.14830.1.S1_at CD748207 - - 3e-1 At2g41225 unknown protein C.G. S.X.
0.03 2e+0 34 GmaAffx.80060.2.S1_at AW202109 - - 5e-15 At5g26740 unknown protein C.G. S.X.
0.03 2e+0 34 GmaAffx.76359.1.S1_at BG406101 - - 4e-4 At1g71110 unknown protein C.G. S.X.
0.02 2e+0 34 GmaAffx.72309.1.S1_at AI966346 - - 2e-3 At5g28390 RNA recognition motif (RRM)-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-3 42 Arabidopsis thaliana At2g36760 818248 UGT73C2 (UDP-glucosyl transferase 73C2) F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMVBOF - - - C.G. S.X.
0.03 2e-1 36 Hordeum vulgare Contig8823_at Contig8823 - - 2e+1 At5g23535 KOW domain-containing protein C.G. S.X.
0.04 3e+0 34 Oryza sativa Os12g0421600 9640.m02212 - - 2e+0 At5g54145 unknown protein C.G. S.X.
0.03 5e-1 36 Populus trichocarpa PtpAffx.204018.1.S1_a_at pmrna7924 hypothetical protein - 4e+0 At5g65610 unknown protein C.G. S.X.
0.03 1e+0 34 Triticum aestivum Ta.10200.1.A1_a_at CK205234 - - 5e+0 At4g02482 chloroplast outer envelope GTP-binding protein, putative C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1621236_at CF512980 hypothetical protein LOC100267550 - 8e-35 At4g26760 MAP65-2 C.G. S.X.
0.03 2e+0 32 Zea mays ZmAffx.630.1.S1_at AI715058 - - 8e-1 At2g30170 catalytic C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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