Gene omics information

Query gene ID GmaAffx.88226.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5071.7GmaAffx.88226.1.S1_atCB063419--9e-20At2g07360SH3 domain-containing proteinS.X.H.G.
0.5778.8Gma.6104.3.S1_atAW348082--3e-3At5g63260zinc finger (CCCH-type) family proteinS.X.H.G.
0.5071.7GmaAffx.74684.1.S1_atBU547287--1e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)S.X.H.G.
0.4867.7Gma.7806.1.S1_atBQ454032--8e-5At3g13340WD-40 repeat family proteinS.X.H.G.
0.4665.5Gma.7636.1.S1_atAW351204--1e-20At5g41950bindingS.X.H.G.
0.3346.1Gma.6104.3.S1_x_atAW348082--3e-3At5g63260zinc finger (CCCH-type) family proteinS.X.H.G.
0.3346.1Gma.11129.1.S1_s_atBE657610--6e-119At3g05840ATSK12S.X.H.G.
0.2939.0Gma.10823.2.S1_atBM307619--2e-82At5g36230eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinS.X.H.G.
0.2735.7GmaAffx.19085.1.S1_atBU547298--3e-27At5g04920vacuolar protein sorting 36 family protein / VPS36 family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.998.8GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
4.497.6GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
4.097.2GSM29312740_1148.1O.R093P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.097.2GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
3.396.2GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.095.6GSM258503Soybean shoot apical meristem, 2 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
2.995.4GSM258498Soybean shoot apical meristem, 2 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
2.995.4GSM191086Soybean_Cotyledon_HI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
2.895.1GSM29310319_1122.1O.R077P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.794.8GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.515e-65248GmaAffx.88226.2.A1_atBI970060--7e-1At3g62920unknown proteinC.G.S.X.
0.031e-138Gma.7498.2.S1_atBE608631--3e-7At1g25490RCN1 (ROOTS CURL IN NPA)C.G.S.X.
0.012e+034PsAffx.C45000031_atPsAffx.C45000031--6e+0At4g33420peroxidase, putativeC.G.S.X.
0.012e+034PsAffx.C36000018_atPsAffx.C36000018--2e-1At2g27500glycosyl hydrolase family 17 proteinC.G.S.X.
0.022e+034Gma.15007.3.S1_s_atCD394083--2e-20At1g04140transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.022e+034Gma.10830.1.S1_atBE820822--2e-3At1g56580unknown proteinC.G.S.X.
0.026e+032PsAffx.C297000007_atPsAffx.C297000007--6e+0At1g20770unknown proteinC.G.S.X.
0.016e+032PsAffx.C232000016_atPsAffx.C232000016--1e-1At2g25720unknown proteinC.G.S.X.
0.016e+032PsAffx.C186000047_atPsAffx.C186000047--7e-2At3g49430SRp34a (Ser/Arg-rich protein 34a)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.089e-2097Arabidopsis thalianaAt2g07360815305SH3 domain-containing proteinF:binding;P:unknown;C:cytosol, nucleus, plasma membrane, membrane;OPMFB---C.G.S.X.
0.131e-756Hordeum vulgareContig12593_atContig12593--2e-4At2g07360SH3 domain-containing proteinC.G.S.X.
0.031e-861Oryza sativaOs03g0265700AK068453.1-SH3 domain containing protein6e-50At2g07360SH3 domain-containing proteinC.G.S.X.
0.241e-31137Populus trichocarpaPtpAffx.9703.1.A1_a_atCV226340hypothetical protein-3e-11At2g07360SH3 domain-containing proteinC.G.S.X.
0.122e-550Triticum aestivumTa.7265.1.A1_a_atCD453899--2e-4At2g07360SH3 domain-containing proteinC.G.S.X.
0.307e-27119Vitis vinifera1611761_atCB007776--9e-29At2g07360SH3 domain-containing proteinC.G.S.X.
0.037e+030Zea maysZmAffx.1315.1.S1_at40794996-143--2e+0At5g41080glycerophosphoryl diester phosphodiesterase family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage