Gene omics information

Query gene ID GmaAffx.88130.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5071.7GmaAffx.88130.1.S1_atBU082486--1e-17At1g04400CRY2 (CRYPTOCHROME 2)S.X.H.G.
0.5576.3GmaAffx.34948.1.S1_atAW755438--2e-1At2g10550-S.X.H.G.
0.4057.1Gma.15087.2.S1_atCA800369--1e-94At4g28860ckl4 (Casein Kinase I-like 4)S.X.H.G.
0.3346.1GmaAffx.78631.1.S1_atBQ613160--5e-31At1g12360KEU (keule)S.X.H.G.
0.2329.9GmaAffx.67700.1.S1_atCB063625--9e-1At5g13620unknown proteinS.X.H.G.
0.1316.3GmaAffx.1876.2.S1_atBG510959--5e-7At3g62980TIR1 (TRANSPORT INHIBITOR RESPONSE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.898.4GSM2946683_3218.2M.V7M1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.698.3GSM29352642_2022.2A.R275P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.498.2GSM29300075_C234.1M.SLM3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.498.2GSM29414510_3144.2H.V7H3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.398.2GSM29341294_C088.1Q.V7Q3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.298.1GSM29443287_3176.2J.SLJ3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.298.1GSM29361342_2054.2B.R307P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.298.1GSM29404291_3108.2F.SLF3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.298.1GSM29339377_C086.1Q.SLQ3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.098.0GSM29328972_1238.1P.R145P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.244e-147521Gma.8053.1.S1_atAW351130cryptochrome 2-2e-35At1g04400CRY2 (CRYPTOCHROME 2)C.G.S.X.
0.013e+034PsAffx.C43000069_atPsAffx.C43000069--3e+0At2g39630glycosyl transferase family 2 proteinC.G.S.X.
0.023e+034HgAffx.10829.1.S1_atCB935584--1e+0At1g0836060S ribosomal protein L10A (RPL10aA)C.G.S.X.
0.023e+034GmaAffx.83511.1.A1_atBU549661--5e+0At3g03120ATARFB1C (ADP-ribosylation factor B1C)C.G.S.X.
0.023e+034GmaAffx.77393.1.S1_atAW306885--4e+0At5g41774unknown proteinC.G.S.X.
0.021e+132PsAffx.psHB039xP10f_atPsAffx.psHB039xP10f--1e+1At4g14819unknown proteinC.G.S.X.
0.011e+132PsAffx.C97000050_atPsAffx.C97000050--8e+0At5g51210OLEO3 (OLEOSIN3)C.G.S.X.
0.011e+132PsAffx.C76000005_atPsAffx.C76000005--4e-2At5g07360amidase family proteinC.G.S.X.
0.011e+132PsAffx.C73000078_atPsAffx.C73000078--1e-1At5g60750CAAX amino terminal protease family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.161e-1791Arabidopsis thalianaAt1g04400839529CRY2 (CRYPTOCHROME 2)Blue light receptor mediating blue-light regulated cotyledon expansion and flowering time. Positive regulator of the flowering-time gene CONSTANS. This gene possesses a light-induced CNT2 N-terminal homodimerisation domain.Involved in blue-light induced stomatal opening. Involved in triggering chromatin decondensation. An 80-residue motif (NC80) is sufficient to confer CRY2's physiological function. It is proposed that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses. Cry2 phosphorylation and degradation both occur in the nucleus.---C.G.S.X.
0.032e-136Hordeum vulgareContig19817_atContig19817--5e+0At5g49050-C.G.S.X.
0.096e-240Oryza sativaOs02g0625000AB103094.1-Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3)(DNA photolyase) (Photoreactivating enzyme)7e-24At1g04400CRY2 (CRYPTOCHROME 2)C.G.S.X.
0.242e-1687Populus trichocarpaPtpAffx.131198.1.S1_atCX185937hypothetical protein-5e-31At1g04400CRY2 (CRYPTOCHROME 2)C.G.S.X.
0.053e-550Triticum aestivumTaAffx.49997.1.S1_atCD924582cryptochrome 2-2e-10At1g04400CRY2 (CRYPTOCHROME 2)C.G.S.X.
0.042e-446Vitis vinifera1615199_atBQ794683--8e-38At4g08920CRY1 (CRYPTOCHROME 1)C.G.S.X.
0.035e-238Zea maysZm.18222.1.S1_atCN845358hypothetical protein LOC100277533-2e+1At5g58650PSY1 (plant peptide containing sulfated tyrosine 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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