Gene omics information

Query gene ID GmaAffx.87924.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.87924.1.S1_atAW596893--9e-39At3g05000transport protein particle (TRAPP) component Bet3 family proteinS.X.H.G.
0.5071.7Gma.17905.2.S1_atCD393233--8e-37At4g01320ATSTE24S.X.H.G.
0.4665.5Gma.3820.3.S1_a_atBI968156--3e-3At1g30230elongation factor 1-beta / EF-1-betaS.X.H.G.
0.4463.3GmaAffx.56409.1.S1_atBU965321--1e-16At1g08750GPI-anchor transamidase, putativeS.X.H.G.
0.4463.3Gma.3084.2.S1_a_atBU081126--1e+0At2g24395chaperone protein dnaJ-relatedS.X.H.G.
0.4259.3Gma.2892.1.S1_atCD398484--3e-36At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.596.6GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.195.8GSM29360131_2069.2B.R213L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.195.8GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
2.794.8GSM29333322_1549.1Q.R078L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.794.8GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
2.694.5GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
2.694.5GSM29358416_2089.2B.R181U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.694.5GSM29288661_1483.1L.R292U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.493.8GSM29358920_2073.2B.R308L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.493.8GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136PsAffx.CL2371Contig1_atPsAffx.CL2371Contig1--4e+0At3g05000transport protein particle (TRAPP) component Bet3 family proteinC.G.S.X.
0.012e+034PsAffx.C126000024_atPsAffx.C126000024--2e+0At5g53880unknown proteinC.G.S.X.
0.022e+034PsAffx.C1000052_atPsAffx.C1000052--4e-1At5g30495-C.G.S.X.
0.022e+034GmaAffx.34402.1.A1_atBE659543--4e-1At4g23340oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.022e+034Gma.10751.3.S1_x_atAI856290--8e-24At2g42680MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)C.G.S.X.
0.028e+032PsAffx.CL1670Contig1_atPsAffx.CL1670Contig1--5e+0At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)C.G.S.X.
0.018e+032PsAffx.C250000010_atPsAffx.C250000010--3e+0At5g56380F-box family proteinC.G.S.X.
0.018e+032PsAffx.C2000139_atPsAffx.C2000139--3e-1At1g01750ADF11 (ACTIN DEPOLYMERIZING FACTOR 11)C.G.S.X.
0.018e+032PsAffx.C153000026_atPsAffx.C153000026--5e+0At5g46700TRN2 (TORNADO 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.459e-39161Arabidopsis thalianaAt3g05000819661transport protein particle (TRAPP) component Bet3 family proteinF:transporter activity;P:pollen tube development;C:cellular_component unknown;MFOP---C.G.S.X.
0.251e-2099Hordeum vulgareContig8380_atContig8380--5e-10At3g05000transport protein particle (TRAPP) component Bet3 family proteinC.G.S.X.
0.191e-1481Oryza sativaOs07g0291100AK072735.1-Transport protein particle (TRAPP) component, Bet3family protein2e-12At3g05000transport protein particle (TRAPP) component Bet3 family proteinC.G.S.X.
0.391e-32141Populus trichocarpaPtp.6724.1.S1_s_atCV265736hypothetical protein-8e-15At3g05000transport protein particle (TRAPP) component Bet3 family proteinC.G.S.X.
0.215e-1685Triticum aestivumTa.7375.1.S1_atCK210990--2e-9At3g05000transport protein particle (TRAPP) component Bet3 family proteinC.G.S.X.
0.503e-48190Vitis vinifera1616141_atCB345889hypothetical protein LOC100258923-3e-48At3g05000transport protein particle (TRAPP) component Bet3 family proteinC.G.S.X.
0.233e-21101Zea maysZm.9351.1.A1_a_atCF630860transport protein particle component, Bet3 containing protein /// transport protein particle component, Bet3 containing protein /// transport protein particle component, Bet3 containing protein-4e-20At3g05000transport protein particle (TRAPP) component Bet3 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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