Gene omics information

Query gene ID GmaAffx.87850.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.1GmaAffx.87850.1.S1_atBU080614--6e-14At5g47020glycine-rich proteinS.X.H.G.
0.6786.1GmaAffx.43012.1.S1_atAW733354--1e-8At2g35110GRL (GNARLED)S.X.H.G.
0.6080.7GmaAffx.75246.1.S1_atAW508335--2e-14At1g60800NIK3 (NSP-INTERACTING KINASE 3)S.X.H.G.
0.4057.1GmaAffx.83370.1.S1_atBQ080389--1e-8At5g25510serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeS.X.H.G.
0.3650.8GmaAffx.52789.1.S1_atAW203783--2e-10At2g20990SYTA (SYNAPTOTAGMIN A)S.X.H.G.
0.3548.6Gma.13221.2.S1_atBU082968--1e+0At1g51390NFU5S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.297.4GSM29388233_3082.2E.SLE2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.197.3GSM29389242_2212.2E.R101P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.997.1GSM29273479_1378.1J.R236P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.997.1GSM29383070_2182.2D.R057P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.997.1GSM29387930_2202.2E.R190P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.897.0GSM29381355_2166.2D.R166P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.897.0GSM29363058_2058.2B.R092P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.796.8GSM29398237_2266.2F.R123P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.796.8GSM29441672_2472.2J.R108P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.696.7GSM24485127_SLO.M5W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e+032PsAffx.C50000011_atPsAffx.C50000011--6e-12At1g34130STT3B (staurosporin and temperature sensitive 3-like b)C.G.S.X.
0.035e+032GmaAffx.75830.1.S1_atAI930627--3e-91At2g22125bindingC.G.S.X.
0.035e+032GmaAffx.5962.1.A1_atBU547811--4e-1At5g62360invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.015e+032Gma.17524.1.S1_atL34844.1phytochrome A-9e-52At1g09570PHYA (PHYTOCHROME A)C.G.S.X.
0.035e+032Gma.12152.1.S1_atBG650241--4e-14At1g74260PUR4 (purine biosynthesis 4)C.G.S.X.
0.032e+130PsAffx.psMA010xF18f_atPsAffx.psMA010xF18f--2e+1At5g47310unknown proteinC.G.S.X.
0.012e+130PsAffx.CL462Contig1_atPsAffx.CL462Contig1--4e+0At1g48170unknown proteinC.G.S.X.
0.032e+130PsAffx.CL2536Contig1_atPsAffx.CL2536Contig1--9e-1At2g02880mucin-relatedC.G.S.X.
0.012e+130PsAffx.C80000081_atPsAffx.C80000081--2e-1At4g30770unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.056e-1477Arabidopsis thalianaAt5g47020834748glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA---C.G.S.X.
0.046e+030Hordeum vulgareHT08H21u_atHT08H21u--2e+0At1g64130unknown proteinC.G.S.X.
0.036e+032Oryza sativaOs10g04242009638.m02454--1e+0At5g55131-C.G.S.X.
0.131e-37157Populus trichocarpaPtpAffx.220020.1.S1_atpmrna36266hypothetical protein-6e-71At5g47020glycine-rich proteinC.G.S.X.
0.052e-136Triticum aestivumTa.18365.1.S1_atCA635232--7e-1At3g15790MBD11C.G.S.X.
0.042e-134Vitis vinifera1617512_atCB971930--2e+1At5g11680unknown proteinC.G.S.X.
0.035e+030Zea maysZm.9837.1.A1_atBM341641--9e-1At1g71740unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage