Gene omics information

Query gene ID	GmaAffx.86503.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.86503.1.S1_at	BG157670	-	-	3e+0	At5g13890	unknown protein	S.X.	H.G.	Please select
0.42	59.3	GmaAffx.86724.1.S1_at	BI468815	-	-	1e-33	At3g03570	-	S.X.	H.G.	Please select
0.36	50.8	GmaAffx.40419.1.S1_at	BF325410	-	-	1e-11	At3g03570	-	S.X.	H.G.	Please select
0.29	39.0	GmaAffx.76624.1.S1_at	CA939046	-	-	6e-10	At4g31580	SRZ-22	S.X.	H.G.	Please select
0.19	23.7	GmaAffx.81052.2.S1_at	BM528722	-	-	6e-39	At3g58500	PP2A-3 (PROTEIN PHOSPHATASE 2A-3)	S.X.	H.G.	Please select
0.13	16.3	Gma.12030.3.S1_a_at	BG359479	-	-	4e+0	At3g47341	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.1	98.5	GSM293254	40_1540.1P.R050P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.8	98.4	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.5	98.3	GSM292917	8_C216.1L.R9L3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM293534	4_3006.2A.R9A1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM293724	59_2130.2C.R207P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM293247	34_C066.1P.R9P2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM294025	76_3104.2F.V7F3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM294293	45_3162.2I.R9I3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM293289	72_1238.1P.R145P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM293529	45_3018.2A.R9A3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.19	1e-25	117	Gma.16657.2.S1_at	AW756079	-	-	7e-18	At3g54190	-	C.G.	S.X.	Please select
0.04	2e-5	50	GmaAffx.91578.1.S1_s_at	CF807303	-	-	6e-74	At3g54190	-	C.G.	S.X.	Please select
0.04	2e-5	50	GmaAffx.91578.1.S1_at	CF807303	-	-	6e-74	At3g54190	-	C.G.	S.X.	Please select
0.04	2e-5	50	GmaAffx.91578.1.S1_x_at	CF807303	-	-	6e-74	At3g54190	-	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C58000038_at	PsAffx.C58000038	-	-	6e-2	At2g34560	katanin, putative	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C97000008_at	PsAffx.C97000008	-	-	3e-1	At2g20740	-	C.G.	S.X.	Please select
0.02	1e+0	34	PsAffx.C86000015_at	PsAffx.C86000015	-	-	3e+0	At3g10300	calcium-binding EF hand family protein	C.G.	S.X.	Please select
0.02	1e+0	34	PsAffx.C117000040_at	PsAffx.C117000040	-	-	7e-4	At1g31790	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.04	5e+0	32	PsAffx.CL1050Contig1_at	PsAffx.CL1050Contig1	-	-	5e+0	At1g53708	RTFL9 (ROTUNDIFOLIA LIKE 9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e+0	32	Arabidopsis thaliana	At5g13890	831236	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e+0	32	Hordeum vulgare	HW05I01V_at	HW05I01V	-	-	7e+0	At4g25370	Clp amino terminal domain-containing protein	C.G.	S.X.	Please select
0.04	7e+0	32	Oryza sativa	OsAffx.13917.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e-1	36	Populus trichocarpa	PtpAffx.16297.1.A1_at	BU875175	-	-	7e-1	At5g10620	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	32	Triticum aestivum	TaAffx.58549.1.S1_at	CA618661	-	-	2e-2	At4g05070	unknown protein	C.G.	S.X.	Please select
0.03	2e+1	28	Vitis vinifera	1620501_at	CA817454	-	-	6e-23	At3g56020	60S ribosomal protein L41 (RPL41G)	C.G.	S.X.	Please select
0.03	1e+0	32	Zea mays	Zm.2205.1.A1_at	AW324711	hypothetical protein LOC100193198	-	1e+0	At1g23260	MMZ1 (MMS ZWEI HOMOLOGUE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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