CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.86361.1.S1_s_at

Gene name alternative oxidase 2b

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 GmaAffx.86361.1.S1_s_at BG508205 alternative oxidase 2b - 4e-9 At3g27620 AOX1C S.X. H.G.
0.55 76.3 Gma.2143.1.S1_at BE659691 - - 2e-60 At1g77810 galactosyltransferase family protein S.X. H.G.
0.50 71.7 Gma.11120.1.S1_at U87907.1 alternative oxidase 2b - 3e-6 At3g22370 AOX1A (ALTERNATIVE OXIDASE 1A) S.X. H.G.
0.50 71.7 GmaAffx.91355.1.S1_s_at CF807080 alternative oxidase 2b - 7e-5 At5g64210 AOX2 S.X. H.G.
0.36 50.8 Gma.1824.1.S1_at BI469795 - - 7e-16 At5g26030 FC1 (ferrochelatase 1) S.X. H.G.
0.31 42.2 Gma.3675.1.S1_at BI969908 - - 9e-72 At4g01370 ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.6 99.4 GSM293197 79_C053.1O.R9O3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.8 99.3 GSM209597 susceptible_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
7.2 98.9 GSM293113 28_C047.1O.R9O2L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.2 98.9 GSM292158 10_C010.1A.R9A2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.0 98.8 GSM293077 77_1077.1N.R046L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.4 98.6 GSM209596 resistant_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
6.1 98.5 GSM209587 resistant_24hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
6.0 98.5 GSM292218 86-C016.1A.V7A3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9 98.5 GSM293137 4_C053.1O.R9O3U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9 98.5 GSM292208 70_C004.1A.R9A1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.44 0 751 Gma.11120.1.S1_at U87907.1 alternative oxidase 2b - 3e-6 At3g22370 AOX1A (ALTERNATIVE OXIDASE 1A) C.G. S.X.
0.17 3e-20 99 Gma.8415.1.S1_at U87906.1 alternative oxidase 2a - 3e-21 At5g64210 AOX2 C.G. S.X.
0.04 2e-2 40 GmaAffx.50367.1.S1_at BI469630 - - 9e-1 At1g33850 40S ribosomal protein S15, putative C.G. S.X.
0.12 2e-2 40 Gma.1439.1.S1_at X68702.1 alternative oxidase - 3e-43 At3g22360 AOX1B C.G. S.X.
0.02 8e-2 38 PsAffx.C162000046_at PsAffx.C162000046 - - 9e+0 At5g20170 unknown protein C.G. S.X.
0.03 3e-1 36 GmaAffx.88038.1.S1_at BQ299113 - - 1e-7 At5g04070 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.03 3e-1 36 Gma.12085.1.A1_at BG508230 - - 1e+0 At1g38630 unknown protein C.G. S.X.
0.02 1e+0 34 Gma.378.1.S1_at AI938108 - - 2e-22 At2g42610 LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10) C.G. S.X.
0.03 5e+0 32 GmaAffx.84776.1.S1_at CA784730 - - 1e-22 At1g16860 merozoite surface protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 4e-9 61 Arabidopsis thaliana At3g27620 822384 AOX1C encodes an isoform of alternate oxidase. expressed in all tissues examined and expression is not induced by antimycin A, an inhibitor of complex III in the mitochondrial respiratory chain. - - - C.G. S.X.
0.03 4e-1 34 Hordeum vulgare Contig5888_at Contig5888 - - 7e-4 At3g22370 AOX1A (ALTERNATIVE OXIDASE 1A) C.G. S.X.
0.04 7e+0 32 Oryza sativa Os07g0136500 9635.m00366 - Conserved hypothetical protein 2e+0 At3g06760 - C.G. S.X.
0.10 2e-5 50 Populus trichocarpa PtpAffx.74112.1.A1_at BP930450 hypothetical protein - 8e-5 At1g32350 AOX1D (alternative oxidase 1D) C.G. S.X.
0.03 4e+0 32 Triticum aestivum Ta.9729.2.A1_a_at CA672059 - - 4e-6 At5g63970 copine-related C.G. S.X.
0.15 9e-29 125 Vitis vinifera 1611398_at CD801312 mitochondrial alternative oxidase 2 - 4e-18 At5g64210 AOX2 C.G. S.X.
0.05 3e-2 38 Zea mays Zm.12381.2.S1_x_at CF637259 - - 2e-1 At1g11270 F-box family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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