Gene omics information

Query gene ID GmaAffx.85890.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.8GmaAffx.85890.1.S1_atBG044578--1e-66At3g17760GAD5 (glutamate decarboxylase 5)S.X.H.G.
0.6181.8GmaAffx.82451.1.S1_atAW277882--4e-5At5g40630ubiquitin family proteinS.X.H.G.
0.5374.2GmaAffx.91310.1.S1_s_atCF806507endo-1,4-beta-glucancase precursor-9e-17At4g24260ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3)S.X.H.G.
0.5071.7Gma.4597.2.S1_atBM892632--2e+0At4g21760BGLU47 (Beta-glucosidase 47)S.X.H.G.
0.5071.7GmaAffx.90341.1.S1_s_atCF806066endo-1,4-beta-glucancase precursor-1e-46At5g49720ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)S.X.H.G.
0.4766.6GmaAffx.90341.1.S1_atCF806066endo-1,4-beta-glucancase precursor-1e-46At5g49720ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)S.X.H.G.
0.4665.5GmaAffx.89517.1.S1_s_atCK606525--3e-26At2g46225ABIL1 (Abi-1-like 1)S.X.H.G.
0.4057.1GmaAffx.80879.1.S1_atBE554841--4e-27At5g62890permease, putativeS.X.H.G.
0.2633.9Gma.338.2.S1_s_atAW569086cationic peroxidase 2 /// peroxidase-2e-27At4g21960PRXR1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.699.1GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.898.4GSM238048Soybean-Mandarin-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
5.598.3GSM24482721_SLO.M3W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.298.1GSM29332414_C074.1Q.V7Q1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.998.0GSM29389141_3080.2E.V7E2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.998.0GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.797.8GSM29353954_3007.2A.SLA2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.397.5GSM29357082_3003.2A.V7A1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.397.5GSM29217834-1006.1A.R003P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.297.4GSM29309511_C045.1O.V7O2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.362e-32141Gma.6394.1.S1_atAY323131.1GAD protein-1e-52At5g17330GADC.G.S.X.
0.048e-1065Gma.891.1.S1_atCA785884--1e-7At1g65960GAD2 (GLUTAMATE DECARBOXYLASE 2)C.G.S.X.
0.123e-654GmaAffx.42805.1.S1_atCA782727--3e-16At5g17330GADC.G.S.X.
0.017e-136PsAffx.C450000006_atPsAffx.C450000006--8e-1At1g07140SIRANBPC.G.S.X.
0.027e-136GmaAffx.5340.1.A1_atBU547246--4e-1At1g66400calmodulin-related protein, putativeC.G.S.X.
0.037e-136GmaAffx.30249.1.S1_atBG726052--8e-1At1g21500unknown proteinC.G.S.X.
0.027e-136Gma.6814.1.S1_atCD397900--2e-2At1g15710prephenate dehydrogenase family proteinC.G.S.X.
0.027e-136Gma.4331.3.S1_atCD402390--5e+0At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.037e-136Gma.17250.1.A1_atBI969790--8e-1At5g54145unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.551e-66254Arabidopsis thalianaAt3g17760821044GAD5 (glutamate decarboxylase 5)F:calmodulin binding;P:carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate;C:cellular_component unknown;BFPOMAV---C.G.S.X.
0.384e-28125Hordeum vulgareContig17092_atContig17092--9e-38At5g17330GADC.G.S.X.
0.362e-36155Oryza sativaOs08g0465800AB056060.1-Glutamate decarboxylase (EC 4.1.1.15)2e-48At5g17330GADC.G.S.X.
0.543e-74280Populus trichocarpaPtpAffx.204028.1.S1_atpmrna7945hypothetical protein-6e-60At1g65960GAD2 (GLUTAMATE DECARBOXYLASE 2)C.G.S.X.
0.192e-1273Triticum aestivumTaAffx.133491.1.S1_x_atBJ257599--9e-51At5g17330GADC.G.S.X.
0.652e-136484Vitis vinifera1610801_atCB969609similar to Glutamate decarboxylase-8e-62At3g17760GAD5 (glutamate decarboxylase 5)C.G.S.X.
0.261e-21103Zea maysZm.3849.1.S1_atCK370197glutamate decarboxylase-3e-21At3g17760GAD5 (glutamate decarboxylase 5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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