Gene omics information

Query gene ID	GmaAffx.85706.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.46	65.5	GmaAffx.85706.1.S1_at	BG882274	-	-	3e-30	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	S.X.	H.G.	Please select
0.73	88.9	GmaAffx.87739.1.S1_at	BE440603	-	-	7e-6	At2g28110	FRA8 (FRAGILE FIBER 8)	S.X.	H.G.	Please select
0.67	86.1	GmaAffx.87897.1.S1_at	BU083159	-	-	1e-6	At2g34410	O-acetyltransferase family protein	S.X.	H.G.	Please select
0.63	82.9	Gma.16155.2.S1_at	BM086026	-	-	1e-19	At1g29890	acetyltransferase-related	S.X.	H.G.	Please select
0.55	76.3	Gma.14345.1.S1_a_at	BU544949	-	-	2e-53	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	S.X.	H.G.	Please select
0.35	48.6	GmaAffx.91310.1.S1_at	CF806507	endo-1,4-beta-glucancase precursor	-	9e-17	At4g24260	ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.6	98.3	GSM294175	38_3132.2H.R9H1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2	98.1	GSM293952	9_3078.2E.SLE1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.1	98.1	GSM294277	30_3152.2I.SLI2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM294104	60_2296.2G.R136P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM294129	83_2310.2G.R097P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM294123	78_2314.2G.R133P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM293744	77_2114.2C.R285P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM244808	17_SLO.M5W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.4	97.6	GSM171673	27_Z.C.M.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.4	97.6	GSM293882	33_3082.2E.SLE2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	2e-26	121	Gma.14345.1.S1_a_at	BU544949	-	-	2e-53	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	C.G.	S.X.	Please select
0.11	2e-26	121	Gma.14345.1.S1_s_at	BU544949	-	-	2e-53	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	C.G.	S.X.	Please select
0.02	2e-1	38	Gma.15739.1.A1_at	BI971013	-	-	5e+0	At3g28120	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	36	PsAffx.C217000018_s_at	PsAffx.C217000018	-	-	4e-1	At5g66675	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	36	PsAffx.C207000011_s_at	PsAffx.C207000011	-	-	7e-1	At5g66675	unknown protein	C.G.	S.X.	Please select
0.01	7e-1	36	PsAffx.C16000017_at	PsAffx.C16000017	-	-	3e-2	At1g26120	esterase-related	C.G.	S.X.	Please select
0.00	3e+0	34	PsAffx.C77000058_at	PsAffx.C77000058	-	-	1e-3	At2g22430	ATHB6	C.G.	S.X.	Please select
0.00	3e+0	34	PsAffx.C57000023_at	PsAffx.C57000023	-	-	1e-1	At4g17950	DNA-binding family protein	C.G.	S.X.	Please select
0.01	3e+0	34	PsAffx.C49000056_at	PsAffx.C49000056	-	-	7e+0	At5g22650	HD2B (HISTONE DEACETYLASE 2B)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	3e-30	133	Arabidopsis thaliana	At2g35020	818066	UTP--glucose-1-phosphate uridylyltransferase family protein	F:nucleotidyltransferase activity;P:metabolic process;C:cellular_component unknown;MFOBP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.27	4e-31	135	Hordeum vulgare	Contig7581_at	Contig7581	-	-	4e-3	At1g31070	UDP-N-acetylglucosamine pyrophosphorylase-related	C.G.	S.X.	Please select
0.25	5e-24	113	Oryza sativa	Os08g0206900	AK071409.1	-	UTP--glucose-1-phosphate uridylyltransferasefamily protein	7e-8	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.46	1e-134	480	Populus trichocarpa	PtpAffx.219964.1.S1_at	pmrna36154	hypothetical protein	-	2e-78	At1g31070	UDP-N-acetylglucosamine pyrophosphorylase-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	8e+0	32	Triticum aestivum	TaAffx.86175.1.S1_at	CA615255	-	-	2e-1	At2g34630	geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative	C.G.	S.X.	Please select
0.02	2e+0	32	Vitis vinifera	1621095_at	CF403412	-	-	9e-1	At3g29230	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.19	4e-21	101	Zea mays	Zm.4811.1.A1_a_at	CF624047	hypothetical protein LOC100279878 /// UDP-N-acetylglucosamine pyrophosphorylase	-	6e-5	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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