Gene omics information

Query gene ID GmaAffx.84879.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.84879.1.S1_atAI735921--6e-15At1g17810BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)S.X.H.G.
0.8091.5Gma.13356.1.S1_atAB046874.1allergen Gly m Bd 28K-2e-1At5g62130Per1-like protein-relatedS.X.H.G.
0.8091.5Gma.8432.1.S1_atU59425.1precursor (AA -24 to 403)-3e+0At4g28990RNA-binding protein-relatedS.X.H.G.
0.7790.3Gma.16820.1.S1_s_atX05652.1glycinin A5A4B3 /// A5A4B3 subunits precursor (aa -23 to 539) /// glycinin-5e-3At5g19260unknown proteinS.X.H.G.
0.7388.9Gma.953.1.S1_atBE823997--6e+0At5g40700unknown proteinS.X.H.G.
0.6786.1Gma.1880.2.S1_atAW704809--3e+0At5g25890IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
364.6100.0GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
269.4100.0GSM309341Wild type 1GSE12300Suppression of oleosin in soybean cotyledon
266.7100.0GSM309343transgenic RNAiOleosin, biol rep 1, tech rep 1GSE12300Suppression of oleosin in soybean cotyledon
262.4100.0GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledon
248.2100.0GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
242.0100.0GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
236.8100.0GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
234.3100.0GSM309527storage protein suppression expt, control tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
225.8100.0GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
222.6100.0GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledon
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.562e-37157GmaAffx.79829.1.S1_atAI941230--8e-17At1g17810BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)C.G.S.X.
0.081e-1687Gma.918.1.S1_atBE823317--4e-6At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)C.G.S.X.
0.041e-448Gma.5998.1.A1_atBI968591--1e-48At4g35100PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3)C.G.S.X.
0.041e-448Gma.14992.1.S1_atBE823350--4e-51At4g35100PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3)C.G.S.X.
0.031e-138Gma.11324.2.S1_a_atCD397701--1e-14At3g16240DELTA-TIPC.G.S.X.
0.031e-138Gma.11324.2.S1_atCD397701--1e-14At3g16240DELTA-TIPC.G.S.X.
0.024e-136GmaAffx.91504.1.S1_atCF809102--2e-6At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.024e-136GmaAffx.91504.1.A1_s_atCF807229--2e-6At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.012e+034PsAffx.C80000037_atPsAffx.C80000037--4e-1At2g22460unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.266e-1581Arabidopsis thalianaAt1g17810838359BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete---C.G.S.X.
0.041e-136Hordeum vulgareContig23290_atContig23290--2e-1At5g10400histone H3C.G.S.X.
0.032e+034Oryza sativaOs12g02312009640.m01249--1e+0At3g51100unknown proteinC.G.S.X.
0.211e-1067Populus trichocarpaPtpAffx.217238.1.S1_s_atpmrna32424aquaporin, MIP family, TIP subfamily-9e-12At1g17810BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)C.G.S.X.
0.035e-342Triticum aestivumTaAffx.13222.1.A1_atBJ254457--1e+0At1g03150GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.031e+032Vitis vinifera1614260_atBQ798900hypothetical protein LOC100244318-2e+0At4g16780ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2)C.G.S.X.
0.035e-134Zea maysZm.12825.1.S1_atCA402807--4e-2At2g36830GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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