Gene omics information

Query gene ID	GmaAffx.84566.3.S1_s_at
Gene name	MYB transcription factor MYB60 /// MYB transcription factor MYB74
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.84566.3.S1_s_at	BG045916	MYB transcription factor MYB60 /// MYB transcription factor MYB74	-	7e-32	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	S.X.	H.G.	Please select
0.40	57.1	GmaAffx.41618.1.S1_at	CD407254	-	-	3e-1	At1g72430	auxin-responsive protein-related	S.X.	H.G.	Please select
0.27	35.7	Gma.10441.1.S1_s_at	BE803701	-	-	3e-2	At3g57950	unknown protein	S.X.	H.G.	Please select
0.15	18.7	GmaAffx.42587.1.A1_at	BU544395	-	-	5e+0	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	S.X.	H.G.	Please select
0.04	7.0	Gma.4505.1.A1_at	CD403081	-	-	5e+0	At5g24655	LSU4 (RESPONSE TO LOW SULFUR 4)	S.X.	H.G.	Please select
0.02	4.5	Gma.6672.2.S1_x_at	BG405072	-	-	3e-2	At4g21620	glycine-rich protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
235.9	100.0	GSM201122	Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
95.0	100.0	GSM201123	Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
74.3	100.0	GSM244814	19_SLO.M5W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
61.5	99.9	GSM191077	Soybean_Cotyledon_SUS1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
44.0	99.9	GSM147937	Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
41.4	99.9	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
37.5	99.9	GSM147946	Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
35.8	99.9	GSM201112	Laser capture microdissected (LCM) cotyledon adaxial epidermis at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
33.5	99.9	GSM201113	Laser capture microdissected (LCM) cotyledon adaxial epidermis at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
32.1	99.9	GSM191078	Soybean_Cotyledon_SUS2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	724	GmaAffx.84566.3.S1_at	BG045916	MYB transcription factor MYB74	-	7e-32	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please select
1.00	0	724	GmaAffx.84566.3.S1_x_at	BG045916	MYB transcription factor MYB74	-	7e-32	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please select
0.46	8e-88	323	GmaAffx.84566.1.S1_at	BI786849	MYB transcription factor MYB60	-	4e-63	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	C.G.	S.X.	Please select
0.46	8e-88	323	GmaAffx.84566.1.S1_x_at	BI786849	MYB transcription factor MYB60	-	4e-63	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	C.G.	S.X.	Please select
0.46	8e-88	323	GmaAffx.84566.1.S1_s_at	BI786849	MYB transcription factor MYB60	-	4e-63	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	C.G.	S.X.	Please select
0.21	3e-47	188	GmaAffx.83663.1.S1_at	AW596799	MYB transcription factor MYB187	-	9e-52	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	C.G.	S.X.	Please select
0.29	7e-39	161	GmaAffx.78009.1.S1_at	AI966063	-	-	6e-33	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please select
0.28	5e-21	101	GmaAffx.84566.2.S1_at	AI736654	MYB transcription factor MYB60	-	1e-21	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	C.G.	S.X.	Please select
0.13	2e-17	89	GmaAffx.12474.1.S1_at	BE346566	MYB transcription factor MYB171	-	3e-9	At5g62470	MYB96 (myb domain protein 96)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	7e-32	137	Arabidopsis thaliana	At3g47600	823914	ATMYB94 (MYB DOMAIN PROTEIN 94)	Encodes a putative transcription factor (MYB94).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	32	Hordeum vulgare	Contig4570_s_at	Contig4570	-	-	5e+0	At5g50665	unknown protein	C.G.	S.X.	Please select
0.08	2e-8	59	Oryza sativa	Os11g0558200	AK110844.1	-	P-type R2R3 Myb protein (Fragment)	3e-9	At1g08810	MYB60 (myb domain protein 60)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.19	1e-24	113	Populus trichocarpa	PtpAffx.213932.1.S1_at	pmrna27162	hypothetical protein	-	5e-41	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e-1	36	Triticum aestivum	TaAffx.81650.1.S1_at	CA691240	-	-	1e+0	At1g17880	nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative	C.G.	S.X.	Please select
0.16	8e-29	125	Vitis vinifera	1614953_at	CF519173	R2R3 Myb30 transcription factor	-	4e-33	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please select
0.15	8e-2	36	Zea mays	Zm.13886.1.S1_x_at	AF099412.1	R2R3MYB-domain protein	-	6e-2	At5g62470	MYB96 (myb domain protein 96)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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