Gene omics information

Query gene ID	GmaAffx.84209.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	79.5	GmaAffx.84209.1.S1_at	BQ610588	-	-	1e-16	At2g17820	ATHK1 (histidine kinase 1)	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.43786.2.S1_at	BU080930	-	-	4e-12	At2g17820	ATHK1 (histidine kinase 1)	S.X.	H.G.	Please select
0.36	50.8	Gma.6813.1.A1_at	AW308988	-	-	5e-3	At3g23430	PHO1 (phosphate 1)	S.X.	H.G.	Please select
0.19	23.7	GmaAffx.54265.1.S1_s_at	BU546096	-	-	2e-3	At4g23270	protein kinase family protein	S.X.	H.G.	Please select
0.12	15.1	GmaAffx.17899.1.A1_at	BU548762	-	-	3e-1	At4g10150	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.08	11.0	GmaAffx.84823.1.S1_at	CA938597	-	-	1e+0	At4g25760	AtGDU2 (Arabidopsis thaliana GLUTAMINE DUMPER 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.9	99.4	GSM292533	47_1288.1H.R182P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.9	99.2	GSM292421	24_1264.1G.R167P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.7	99.1	GSM292403	7_1212.1F.R130P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.4	99.1	GSM292377	50_1228.1F.R139P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.3	99.1	GSM292186	47-1025.1A.R014U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.6	98.9	GSM292825	82_C184.1K.R9K1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.4	98.9	GSM292172	28_1025.1A.R014L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1	98.8	GSM292682	31_1380.1J.R237P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.9	98.8	GSM292294	40_1184.1E.R112P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.9	98.8	GSM293790	34_2150.2D.R295P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	5e-29	129	GmaAffx.92147.1.S1_at	CF807872	-	-	2e-9	At2g17820	ATHK1 (histidine kinase 1)	C.G.	S.X.	Please select
0.16	1e-23	111	GmaAffx.43786.2.S1_at	BU080930	-	-	4e-12	At2g17820	ATHK1 (histidine kinase 1)	C.G.	S.X.	Please select
0.09	3e-2	40	GmaAffx.18096.1.S1_at	BG509281	-	-	3e+0	At5g05365	metal ion binding	C.G.	S.X.	Please select
0.01	5e-1	36	PsAffx.C44000014_at	PsAffx.C44000014	-	-	2e+0	At2g29628	unknown protein	C.G.	S.X.	Please select
0.00	5e-1	36	PsAffx.C11000098_at	PsAffx.C11000098	-	-	1e+0	At4g35200	unknown protein	C.G.	S.X.	Please select
0.02	5e-1	36	Gma.6877.1.A1_at	BE659856	-	-	3e-2	At2g03880	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C32000016_at	PsAffx.C32000016	-	-	4e-1	At3g11773	electron carrier/ protein disulfide oxidoreductase	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C3000023_at	PsAffx.C3000023	-	-	2e-1	At2g36080	DNA-binding protein, putative	C.G.	S.X.	Please select
0.04	2e+0	34	HgAffx.3392.1.S1_at	CK349298	-	-	3e+0	At5g44720	molybdenum cofactor sulfurase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	1e-16	87	Arabidopsis thaliana	At2g17820	816291	ATHK1 (histidine kinase 1)	Encodes a member of the histidine kinase family.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e+1	30	Hordeum vulgare	HVSMEm0007B06r2_s_at	HVSMEm0007B06r2	-	-	1e-2	At1g47128	RD21 (responsive to dehydration 21)	C.G.	S.X.	Please select
0.04	3e+0	34	Oryza sativa	OsAffx.13881.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.21	2e-12	73	Populus trichocarpa	Ptp.974.1.S1_at	CK089834	histidine kinase osmosensor protein /// histidine kinase osmosensor protein	-	5e-10	At2g17820	ATHK1 (histidine kinase 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e+0	32	Triticum aestivum	TaAffx.104218.2.S1_at	CA689401	-	-	1e+0	At5g64650	ribosomal protein L17 family protein	C.G.	S.X.	Please select
0.03	4e-1	34	Vitis vinifera	1620873_at	CB339891	hypothetical protein LOC100247687	-	1e-15	At2g37660	binding / catalytic/ coenzyme binding	C.G.	S.X.	Please select
0.03	9e+0	30	Zea mays	ZmAffx.524.1.A1_at	AI711679	-	-	1e+1	At5g17450	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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