CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.84199.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 92.5 GmaAffx.84199.1.S1_at AW201276 - - 3e-22 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative S.X. H.G.
0.67 86.1 GmaAffx.72283.1.S1_at BG352370 - - 2e-8 At1g21790 - S.X. H.G.
0.43 60.6 GmaAffx.78058.1.S1_at BF423924 - - 2e-14 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative S.X. H.G.
0.11 14.2 GmaAffx.77903.1.S1_at BE611583 - - 1e-47 At2g35390 ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI) S.X. H.G.
0.11 14.2 GmaAffx.90063.1.S1_s_at CF805788 glutathione S-transferase GST 23 - 2e-5 At5g41210 ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1) S.X. H.G.
0.03 5.8 Gma.6261.2.S1_at BM085245 - - 1e-12 At4g17640 CKB2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
30.9 99.9 GSM209591 mock_0hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.3 99.3 GSM209582 mock_0hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.2 99.3 GSM209581 susceptible_48hours_rep1 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
7.9 99.0 GSM209599 susceptible_48hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
7.7 99.0 GSM245933 Leaf_Water Control_Rep 1_48 h After Treatment GSE9730 Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
6.1 98.5 GSM170927 Rust Innoculated, biological rep2 GSE7108 Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
5.7 98.4 GSM245934 Leaf_Water Control_Rep 2_48 h After Treatment GSE9730 Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
5.6 98.3 GSM209597 susceptible_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.6 98.3 GSM245936 Leaf_LCO treated_Rep 1_48 h After Treatment GSE9730 Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
5.4 98.2 GSM209598 resistant_48hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 HgAffx.6459.1.S1_at CB825752 - - 3e-1 At1g54410 dehydrin family protein C.G. S.X.
0.04 1e+0 34 GmaAffx.85652.2.S1_at BM307988 - - 4e-18 At1g67100 LBD40 (LOB DOMAIN-CONTAINING PROTEIN 40) C.G. S.X.
0.03 1e+0 34 GmaAffx.16034.1.S1_at AI856383 - - 5e-16 At3g55240 - C.G. S.X.
0.02 1e+0 34 Gma.6608.1.S1_at BQ610919 - - 1e-27 At4g33410 signal peptide peptidase family protein C.G. S.X.
0.02 1e+0 34 Gma.11043.1.S1_at BE657833 - - 3e-49 At5g05580 FAD8 (FATTY ACID DESATURASE 8) C.G. S.X.
0.02 1e+0 34 Gma.11043.1.S1_a_at BE657833 - - 3e-49 At5g05580 FAD8 (FATTY ACID DESATURASE 8) C.G. S.X.
0.02 5e+0 32 PsAffx.C42000074_at PsAffx.C42000074 - - 9e+0 At5g67590 FRO1 (FROSTBITE1) C.G. S.X.
0.01 5e+0 32 PsAffx.C28000108_at PsAffx.C28000108 - - 2e-2 At4g33020 ZIP9 C.G. S.X.
0.03 5e+0 32 PsAffx.C254000008_at PsAffx.C254000008 - - 5e+0 At1g14890 enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 3e-22 105 Arabidopsis thaliana At5g51970 835272 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro. - - - C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HU05E23u_at HU05E23u - - 2e-1 At3g56950 SIP2 C.G. S.X.
0.04 5e-1 36 Oryza sativa OsAffx.6443.1.A1_at - - - 0 C.G. S.X.
0.32 2e-12 73 Populus trichocarpa PtpAffx.79594.1.S1_s_at CK098523 hypothetical protein - 2e-20 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative C.G. S.X.
0.04 2e+1 30 Triticum aestivum TaAffx.84236.2.S1_at CA641827 - - 1e-1 At4g25630 FIB2 (FIBRILLARIN 2) C.G. S.X.
0.31 6e-21 99 Vitis vinifera 1612918_at CA808864 L-idonate dehydrogenase - 7e-21 At5g51970 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative C.G. S.X.
0.03 7e+0 30 Zea mays ZmAffx.281.1.A1_at AI670409 - - 3e+0 At5g46795 MSP2 (microspore-specific promoter 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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