Gene omics information

Query gene ID	GmaAffx.83663.1.S1_at
Gene name	MYB transcription factor MYB187
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.23	29.9	GmaAffx.83663.1.S1_at	AW596799	MYB transcription factor MYB187	-	9e-52	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.42587.1.A1_at	BU544395	-	-	5e+0	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.86049.1.S1_at	BF598238	-	-	7e-12	At3g48720	transferase family protein	S.X.	H.G.	Please select
0.40	57.1	Gma.3172.1.S1_s_at	BU550006	-	-	3e-3	At5g64120	peroxidase, putative	S.X.	H.G.	Please select
0.31	42.2	GmaAffx.31822.2.S1_at	BU081987	-	-	5e-8	At1g51460	ABC transporter family protein	S.X.	H.G.	Please select
0.29	39.0	GmaAffx.84566.1.S1_at	BI786849	MYB transcription factor MYB60	-	4e-63	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
162.1	100.0	GSM147938	Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
161.1	100.0	GSM182033	Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
144.7	100.0	GSM182034	Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 3	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
90.7	100.0	GSM191078	Soybean_Cotyledon_SUS2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
76.8	100.0	GSM147937	Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
34.7	99.9	GSM191077	Soybean_Cotyledon_SUS1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
26.0	99.8	GSM294218	69_3140.2H.R9H3P_new, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.8	99.8	GSM182032	Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
23.6	99.8	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.0	99.8	GSM293105	20_C054.1O.R9O3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	3e-108	393	GmaAffx.84566.1.S1_at	BI786849	MYB transcription factor MYB60	-	4e-63	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	C.G.	S.X.	Please select
0.36	3e-108	393	GmaAffx.84566.1.S1_x_at	BI786849	MYB transcription factor MYB60	-	4e-63	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	C.G.	S.X.	Please select
0.36	3e-108	393	GmaAffx.84566.1.S1_s_at	BI786849	MYB transcription factor MYB60	-	4e-63	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	C.G.	S.X.	Please select
0.21	7e-47	188	GmaAffx.84566.3.S1_s_at	BG045916	MYB transcription factor MYB60 /// MYB transcription factor MYB74	-	7e-32	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please select
0.21	7e-47	188	GmaAffx.84566.3.S1_at	BG045916	MYB transcription factor MYB74	-	7e-32	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please select
0.21	7e-47	188	GmaAffx.84566.3.S1_x_at	BG045916	MYB transcription factor MYB74	-	7e-32	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please select
0.16	1e-33	145	GmaAffx.84566.2.S1_at	AI736654	MYB transcription factor MYB60	-	1e-21	At3g28910	MYB30 (MYB DOMAIN PROTEIN 30)	C.G.	S.X.	Please select
0.23	6e-32	139	GmaAffx.78009.1.S1_at	AI966063	-	-	6e-33	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please select
0.20	1e-17	91	GmaAffx.35264.1.S1_at	BE331501	-	-	2e-45	At1g08810	MYB60 (myb domain protein 60)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	9e-52	204	Arabidopsis thaliana	At3g28910	822525	MYB30 (MYB DOMAIN PROTEIN 30)	transcription factor myb homologue	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	9e-1	34	Hordeum vulgare	AF474072_CDS-2_at	AF474072_CDS-2	-	-	3e+0	At4g13180	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.04	4e-3	44	Oryza sativa	Os11g0558200	AK110844.1	-	P-type R2R3 Myb protein (Fragment)	3e-9	At1g08810	MYB60 (myb domain protein 60)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.32	8e-53	208	Populus trichocarpa	PtpAffx.213932.1.S1_at	pmrna27162	hypothetical protein	-	5e-41	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	8e-3	42	Triticum aestivum	TaAffx.117149.1.S1_at	CA599744	-	-	9e-3	At5g06100	MYB33 (MYB DOMAIN PROTEIN 33)	C.G.	S.X.	Please select
0.30	1e-42	173	Vitis vinifera	1614953_at	CF519173	R2R3 Myb30 transcription factor	-	4e-33	At3g47600	ATMYB94 (MYB DOMAIN PROTEIN 94)	C.G.	S.X.	Please select
0.07	2e-1	36	Zea mays	Zm.13886.1.S1_x_at	AF099412.1	R2R3MYB-domain protein	-	6e-2	At5g62470	MYB96 (myb domain protein 96)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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