Gene omics information

Query gene ID	GmaAffx.8328.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.3	GmaAffx.8328.1.S1_at	AW831983	-	-	1e-4	At1g33170	dehydration-responsive family protein	S.X.	H.G.	Please select
0.43	60.6	Gma.7024.1.S1_at	BM308365	-	-	6e-19	At1g13820	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please select
0.40	57.1	GmaAffx.9348.1.S1_at	AW350108	-	-	9e-2	At1g22330	RNA binding / nucleic acid binding / nucleotide binding	S.X.	H.G.	Please select
0.36	50.8	GmaAffx.69457.2.S1_at	BI943979	-	-	4e+0	At3g07710	-	S.X.	H.G.	Please select
0.29	39.0	Gma.13544.1.S1_at	CD417852	cyclin d3	-	7e-10	At4g34160	CYCD3	S.X.	H.G.	Please select
0.12	15.1	GmaAffx.58488.1.S1_at	BI967166	-	-	1e-14	At1g65295	unknown protein	S.X.	H.G.	Please select
0.08	11.0	Gma.17359.1.S1_at	AW596812	-	-	4e-1	At2g07190	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
242.1	100.0	GSM182037	Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
190.6	100.0	GSM191081	Soybean_Cotyledon_EN1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
187.6	100.0	GSM147942	Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
186.8	100.0	GSM182038	Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
160.1	100.0	GSM191082	Soybean_Cotyledon_EN2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
131.0	100.0	GSM147943	Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
88.3	100.0	GSM201125	Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
77.8	100.0	GSM201118	Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
74.4	100.0	GSM182035	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
72.0	100.0	GSM182047	Whole Seed at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	5e-5	50	GmaAffx.58273.1.S1_at	BE608334	-	-	4e-10	At2g45750	dehydration-responsive family protein	C.G.	S.X.	Please select
0.07	7e-4	46	Gma.8016.1.S1_at	BU547223	-	-	8e-18	At4g00750	dehydration-responsive family protein	C.G.	S.X.	Please select
0.02	4e-2	40	Gma.8382.1.S1_at	BE658963	-	-	2e-9	At2g34300	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.05	2e-1	38	Gma.6989.1.A1_at	BU546484	-	-	9e-1	At4g00750	dehydration-responsive family protein	C.G.	S.X.	Please select
0.02	2e-1	38	Gma.15288.1.S1_at	BG650855	-	-	2e-6	At2g39750	dehydration-responsive family protein	C.G.	S.X.	Please select
0.01	7e-1	36	PsAffx.C23000074_at	PsAffx.C23000074	-	-	9e-1	At4g38970	fructose-bisphosphate aldolase, putative	C.G.	S.X.	Please select
0.03	7e-1	36	Gma.9233.1.S1_at	AW734649	-	-	8e-21	At4g00740	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.02	7e-1	36	Gma.8378.1.S1_at	BI969004	-	-	1e-17	At4g14360	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.03	7e-1	36	Gma.612.1.A1_at	AI442942	-	-	4e+0	Atmg00010	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	1e-4	48	Arabidopsis thaliana	At1g33170	840213	dehydration-responsive family protein	F:unknown;P:biological_process unknown;C:unknown;PBOAM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e-1	36	Hordeum vulgare	Contig13791_at	Contig13791	-	-	3e-11	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.05	3e-1	38	Oryza sativa	Os10g0569300	AK072459.1	-	Putative methyltransferase DUF248 family protein	3e-10	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.22	1e-27	125	Populus trichocarpa	PtpAffx.213065.1.S1_at	pmrna25567	hypothetical protein	-	1e-30	At4g00750	dehydration-responsive family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e+0	34	Triticum aestivum	Ta.5250.3.S1_a_at	CA602002	-	-	3e-7	At4g14360	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.16	7e-19	93	Vitis vinifera	1607184_at	CB981964	hypothetical protein LOC100258938	-	8e-24	At4g00750	dehydration-responsive family protein	C.G.	S.X.	Please select
0.02	2e-1	36	Zea mays	Zm.10329.1.S1_at	BQ163458	hypothetical protein LOC100279503	-	1e+0	At5g20500	glutaredoxin, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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