Gene omics information

Query gene ID	GmaAffx.83206.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.83206.1.S1_at	BE610184	-	-	2e-2	At3g26210	CYP71B23	S.X.	H.G.	Please select
0.67	86.1	GmaAffx.83135.1.S1_at	BQ453029	-	-	8e-1	At4g00080	UNE11 (unfertilized embryo sac 11)	S.X.	H.G.	Please select
0.18	22.3	GmaAffx.92678.1.S1_s_at	CF808403	-	-	6e-35	At2g34850	MEE25 (maternal effect embryo arrest 25)	S.X.	H.G.	Please select
0.18	22.3	GmaAffx.93335.1.S1_s_at	CF806304	-	-	7e-52	At3g13920	EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)	S.X.	H.G.	Please select
0.10	13.0	GmaAffx.85706.1.S1_at	BG882274	-	-	3e-30	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	S.X.	H.G.	Please select
0.04	7.0	GmaAffx.88130.1.S1_at	BU082486	-	-	1e-17	At1g04400	CRY2 (CRYPTOCHROME 2)	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.0	98.8	GSM294464	31_3190.2K.SLK2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.7	98.7	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.4	98.6	GSM293133	46_C044.1O.SLO2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.3	98.6	GSM293222	11_1536.1P.R034P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.2	98.6	GSM293507	25_3014.2A.SLA3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.1	98.5	GSM294237	86_3142.2H.SLH3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.1	98.5	GSM294296	48_3150.2I.SLI1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.1	98.5	GSM292877	53_C212.1L.SLL3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.0	98.5	GSM294432	87_3176.2J.SLJ3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.8	98.4	GSM293275	5_C064.1P.V7P2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	7e-34	145	GmaAffx.60645.1.S1_at	BI701603	-	-	2e-4	At3g53300	CYP71B31	C.G.	S.X.	Please select
0.21	7e-31	135	GmaAffx.93309.1.S1_s_at	CF808307	-	-	1e-5	At4g22710	CYP706A2	C.G.	S.X.	Please select
0.20	1e-13	77	GmaAffx.60645.2.S1_at	BQ742710	-	-	8e-1	At5g26810	pectinesterase family protein	C.G.	S.X.	Please select
0.20	1e-13	77	GmaAffx.60645.2.S1_s_at	BQ742710	-	-	8e-1	At5g26810	pectinesterase family protein	C.G.	S.X.	Please select
0.17	5e-4	46	Gma.7061.1.S1_at	BQ785979	-	-	1e-3	At5g57260	CYP71B10	C.G.	S.X.	Please select
0.04	7e-3	42	GmaAffx.86342.1.S1_at	BF425779	-	-	2e+0	At5g66170	-	C.G.	S.X.	Please select
0.04	1e-1	38	GmaAffx.79891.1.S1_at	AI988440	-	-	3e+0	At3g28440	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	38	GmaAffx.79891.1.S1_x_at	AI988440	-	-	3e+0	At3g28440	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C199000012_at	PsAffx.C199000012	-	-	2e+0	At2g43160	epsin N-terminal homology (ENTH) domain-containing protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-2	40	Arabidopsis thaliana	At3g26210	822222	CYP71B23	putative cytochrome P450	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e+1	30	Hordeum vulgare	Contig24993_at	Contig24993	-	-	8e-2	At4g33730	pathogenesis-related protein, putative	C.G.	S.X.	Please select
0.04	1e+1	32	Oryza sativa	OsAffx.29969.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	2e-6	54	Populus trichocarpa	PtpAffx.224493.1.S1_at	pmrna43078	cytochrome P450	-	2e-1	At5g57260	CYP71B10	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e+1	30	Triticum aestivum	TaAffx.38521.1.A1_at	BJ221695	-	-	1e+0	At4g15350	CYP705A2	C.G.	S.X.	Please select
0.13	4e-4	44	Vitis vinifera	1613920_at	CB979957	hypothetical protein LOC100260935	-	2e+0	At1g07830	ribosomal protein L29 family protein	C.G.	S.X.	Please select
0.03	9e+0	30	Zea mays	ZmAffx.777.1.A1_at	AI746253	hypothetical protein LOC100191464	-	2e-1	At5g11440	CID5	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage