Gene omics information

Query gene ID	GmaAffx.83135.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.95	99.4	GmaAffx.83135.1.S1_at	BQ453029	-	-	8e-1	At4g00080	UNE11 (unfertilized embryo sac 11)	S.X.	H.G.	Please select
0.63	82.9	GmaAffx.83206.1.S1_at	BE610184	-	-	2e-2	At3g26210	CYP71B23	S.X.	H.G.	Please select
0.27	35.7	GmaAffx.70346.1.S1_at	BU964958	-	-	5e+0	At4g01940	NFU1	S.X.	H.G.	Please select
0.18	22.3	GmaAffx.93335.1.S1_s_at	CF806304	-	-	7e-52	At3g13920	EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)	S.X.	H.G.	Please select
0.15	18.7	GmaAffx.92678.1.S1_s_at	CF808403	-	-	6e-35	At2g34850	MEE25 (maternal effect embryo arrest 25)	S.X.	H.G.	Please select
0.13	16.3	GmaAffx.85706.1.S1_at	BG882274	-	-	3e-30	At2g35020	UTP--glucose-1-phosphate uridylyltransferase family protein	S.X.	H.G.	Please select
0.11	14.2	GmaAffx.90541.1.S1_s_at	CF806266	-	-	6e-18	At5g22060	ATJ2	S.X.	H.G.	Please select
0.08	11.0	GmaAffx.88130.1.S1_at	BU082486	-	-	1e-17	At1g04400	CRY2 (CRYPTOCHROME 2)	S.X.	H.G.	Please select
0.06	9.0	Gma.13074.2.S1_a_at	BI972676	-	-	2e-11	At5g18650	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.04	7.0	GmaAffx.21491.1.S1_at	AW832637	-	-	3e+0	At5g49480	ATCP1 (Ca2+-binding protein 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.6	99.2	GSM294432	87_3176.2J.SLJ3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.9	99.2	GSM293133	46_C044.1O.SLO2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.7	99.1	GSM294296	48_3150.2I.SLI1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.1	99.0	GSM293751	83_3050.2C.SLC3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.0	99.0	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.8	99.0	GSM293507	25_3014.2A.SLA3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3	98.9	GSM294042	91_3108.2F.SLF3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.2	98.9	GSM292877	53_C212.1L.SLL3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.0	98.8	GSM294237	86_3142.2H.SLH3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.9	98.8	GSM294277	30_3152.2I.SLI2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.83	1e-108	393	GmaAffx.37859.1.S1_at	BU090520	-	-	2e-1	At5g01570	unknown protein	C.G.	S.X.	Please select
0.21	1e-37	157	GmaAffx.93309.1.S1_s_at	CF808307	-	-	1e-5	At4g22710	CYP706A2	C.G.	S.X.	Please select
0.20	5e-3	42	GmaAffx.83954.1.S1_at	CA935587	-	-	3e+0	At4g05260	ubiquitin family protein	C.G.	S.X.	Please select
0.05	2e-2	40	GmaAffx.68456.2.S1_s_at	BQ786198	-	-	4e-3	At4g37370	CYP81D8	C.G.	S.X.	Please select
0.04	3e-1	36	GmaAffx.69323.1.S1_at	BM891104	-	-	2e-1	At3g56790	RNA splicing factor-related	C.G.	S.X.	Please select
0.02	1e+0	34	PsAffx.C59000074_at	PsAffx.C59000074	-	-	1e+1	At5g08565	positive transcription elongation factor/ zinc ion binding	C.G.	S.X.	Please select
0.03	1e+0	34	GmaAffx.91964.1.S1_s_at	CF807689	-	-	4e-26	At1g66200	ATGSR2	C.G.	S.X.	Please select
0.03	1e+0	34	GmaAffx.91964.1.S1_at	CF807689	-	-	4e-26	At1g66200	ATGSR2	C.G.	S.X.	Please select
0.04	1e+0	34	GmaAffx.73680.1.S1_at	BM308220	-	-	2e-1	At1g63105	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	8e-1	34	Arabidopsis thaliana	At4g00080	828192	UNE11 (unfertilized embryo sac 11)	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:double fertilization forming a zygote and endosperm;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	34	Hordeum vulgare	Contig1037_s_at	Contig1037	-	-	2e-11	Atcg00720	-	C.G.	S.X.	Please select
0.04	6e+0	32	Oryza sativa	OsAffx.27926.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	7e-2	38	Populus trichocarpa	PtpAffx.148676.1.S1_at	CK110328	cytochrome P450 /// cytochrome P450 /// cytochrome P450	-	1e-4	At3g26300	CYP71B34	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e-1	36	Triticum aestivum	Ta.3178.1.S1_at	BJ303961	-	-	1e+0	At2g23320	WRKY15	C.G.	S.X.	Please select
0.04	4e+0	30	Vitis vinifera	1615383_at	BQ793432	hypothetical protein LOC100256151	-	1e-3	At4g32272	-	C.G.	S.X.	Please select
0.04	6e+0	30	Zea mays	Zm.6868.1.A1_a_at	AI065511	transposon protein Pong sub-class	-	1e+0	At5g25560	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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