CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.82634.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 86.1 GmaAffx.82634.1.S1_at BM178738 - - 3e-72 At5g16930 AAA-type ATPase family protein S.X. H.G.
0.80 91.5 GmaAffx.92270.1.S1_at CF807322 - - 4e-53 At5g09590 MTHSC70-2 (MITOCHONDRIAL HSP70 2) S.X. H.G.
0.80 91.5 GmaAffx.92270.1.S1_s_at CF807322 - - 4e-53 At5g09590 MTHSC70-2 (MITOCHONDRIAL HSP70 2) S.X. H.G.
0.63 82.9 Gma.6056.1.S1_at BQ453230 - - 2e-4 At1g23100 10 kDa chaperonin, putative S.X. H.G.
0.30 40.4 Gma.3183.1.S1_a_at BE822841 - - 2e-14 At3g20050 ATTCP-1 S.X. H.G.
0.19 23.7 GmaAffx.89146.1.S1_s_at CK605578 - - 3e-56 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
18.7 99.7 GSM267287 Axillary meristem from 10-day-old soybean seedlings GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
17.1 99.7 GSM258496 Vegetative soybean shoot apical meristem GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
17.0 99.7 GSM237069 Soy_shoot apical meristem2 GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
14.0 99.6 GSM237068 Soy_shoot apical meristem GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
12.4 99.5 GSM258502 Vegetative shoot apical meristem, replicate B GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
11.7 99.4 GSM267288 Axillary meristem from 10-day-old soybean seedlings repliacte 2 GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
11.3 99.4 GSM258497 Soybean Shoot Apical Meristem, 1 short-day treatment GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
11.3 99.4 GSM258499 Soybean shoot apical meristem, 4 short-day treatment GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
10.3 99.3 GSM258504 Soybean shoot apical meristem, 4 short-day replicate B GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
9.9 99.3 GSM258498 Soybean shoot apical meristem, 2 short-day treatment GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 3e-18 93 Gma.3134.1.S1_at BU547003 - - 3e-55 At2g18330 AAA-type ATPase family protein C.G. S.X.
0.02 5e-1 36 PsAffx.C54000037_at PsAffx.C54000037 - - 5e-1 At4g28556 RIC7 C.G. S.X.
0.01 5e-1 36 PsAffx.C158000013_at PsAffx.C158000013 - - 2e+0 At5g55240 caleosin-related family protein / embryo-specific protein, putative C.G. S.X.
0.03 2e+0 34 PsAffx.CL430Contig1_at PsAffx.CL430Contig1 - - 1e+0 At4g21890 unknown protein C.G. S.X.
0.01 2e+0 34 PsAffx.C50000074_at PsAffx.C50000074 - - 1e+0 At1g53750 RPT1A (REGULATORY PARTICLE TRIPLE-A 1A) C.G. S.X.
0.01 2e+0 34 PsAffx.C146000036_at PsAffx.C146000036 - - 4e-1 At1g55320 AAE18 (ACYL-ACTIVATING ENZYME 18) C.G. S.X.
0.01 2e+0 34 PsAffx.C130000025_at PsAffx.C130000025 - - 2e-1 At3g02150 PTF1 (PLASTID TRANSCRIPTION FACTOR 1) C.G. S.X.
0.02 2e+0 34 GmaAffx.93335.1.S1_s_at CF806304 - - 7e-52 At3g13920 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1) C.G. S.X.
0.03 2e+0 34 GmaAffx.2469.1.S1_at BE659819 - - 4e+0 At5g26720 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 3e-72 272 Arabidopsis thaliana At5g16930 831556 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;OMBFPAV - - - C.G. S.X.
0.05 1e-2 40 Hordeum vulgare HU09N18u_s_at HU09N18u - - 2e+0 At1g09370 enzyme inhibitor/ pectinesterase C.G. S.X.
0.30 1e-70 268 Oryza sativa Os02g0697600 AK121757.1 - AAA ATPase, central region domain containingprotein 5e-43 At5g16930 AAA-type ATPase family protein C.G. S.X.
0.46 1e-121 436 Populus trichocarpa PtpAffx.210086.1.S1_at pmrna19868 hypothetical protein - 3e-56 At3g03060 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.09 4e-1 36 Triticum aestivum TaAffx.86279.1.S1_at CA612308 - - 9e-1 At3g54420 ATEP3 C.G. S.X.
0.12 1e-10 65 Vitis vinifera 1613488_at CF214643 hypothetical protein LOC100266545 - 2e-5 At5g16930 AAA-type ATPase family protein C.G. S.X.
0.41 2e-65 248 Zea mays Zm.12590.1.S1_at CD441032 - - 2e-53 At5g16930 AAA-type ATPase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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