Gene omics information

Query gene ID	GmaAffx.82510.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	92.5	GmaAffx.82510.1.S1_at	BG239314	-	-	1e-1	At5g37820	NIP4	S.X.	H.G.	Please select
0.43	60.6	GmaAffx.91578.1.S1_at	CF807303	-	-	6e-74	At3g54190	-	S.X.	H.G.	Please select
0.14	17.5	Gma.15133.2.S1_a_at	BE803230	-	-	5e-1	At4g13860	glycine-rich RNA-binding protein, putative	S.X.	H.G.	Please select
0.06	9.0	GmaAffx.32617.1.S1_at	AW395442	-	-	1e-42	At1g07360	zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.01	3.4	Gma.2337.2.S1_a_at	AW756331	-	-	1e-22	At3g13200	EMB2769 (EMBRYO DEFECTIVE 2769)	S.X.	H.G.	Please select
0.01	3.4	GmaAffx.27378.1.S1_at	BG654320	-	-	3e-4	At3g16270	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.2	98.9	GSM209594	resistant_12hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.2	98.1	GSM309343	transgenic RNAiOleosin, biol rep 1, tech rep 1	GSE12300	Suppression of oleosin in soybean cotyledon
4.8	97.9	GSM309527	storage protein suppression expt, control tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
4.8	97.9	GSM309344	transgenic RNAiOleosin, biol rep 1, tech rep 2	GSE12300	Suppression of oleosin in soybean cotyledon
4.7	97.8	GSM309528	storage protein suppression expt, control tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
4.7	97.8	GSM294397	55_2458.2J.R073P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM294489	54_3198.2K.R9K3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM294114	6_3114.2G.SLG1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM294133	87_2304.2G.R142P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292240	49_C033.1B.R9B3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	1e-97	357	Gma.7803.1.S1_at	BE658932	-	-	1e-1	At5g14750	ATMYB66 (MYB DOMAIN PROTEIN 66)	C.G.	S.X.	Please select
0.01	4e-2	40	PsAffx.C45000083_at	PsAffx.C45000083	-	-	3e-1	At5g05990	mitochondrial glycoprotein family protein / MAM33 family protein	C.G.	S.X.	Please select
0.02	1e-1	38	PsAffx.C159000018_at	PsAffx.C159000018	-	-	2e+0	At3g58020	heat shock protein binding	C.G.	S.X.	Please select
0.01	6e-1	36	PsAffx.C35000033_at	PsAffx.C35000033	-	-	4e-1	At4g37240	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	36	GmaAffx.86178.1.S1_at	BG044674	-	-	2e-18	At5g67630	DNA helicase, putative	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C4000089_at	PsAffx.C4000089	-	-	4e+0	At3g43833	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C31000085_at	PsAffx.C31000085	-	-	2e-1	At5g58230	MSI1 (MULTICOPY SUPRESSOR OF IRA1)	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C260000005_at	PsAffx.C260000005	-	-	1e-3	At5g58010	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.02	2e+0	34	GmaAffx.43996.1.A1_at	BU549640	-	-	5e+0	At5g63880	VPS20.1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-1	38	Arabidopsis thaliana	At5g37820	833760	NIP4	F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e+0	32	Hordeum vulgare	EBan01_SQ002_F13_at	EBan01_SQ002_F13	-	-	3e-1	At3g52230	unknown protein	C.G.	S.X.	Please select
0.02	2e-1	38	Oryza sativa	OsAffx.32068.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-3	44	Populus trichocarpa	Ptp.7810.1.S1_at	DN499549	-	-	4e+0	At4g17980	anac071 (Arabidopsis NAC domain containing protein 71)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e-1	36	Triticum aestivum	TaAffx.25189.1.S1_at	CA704886	-	-	2e+1	At4g39100	SHL1 (short life)	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1606586_at	CF516838	-	-	4e+0	At5g44970	-	C.G.	S.X.	Please select
0.02	3e+0	32	Zea mays	Zm.3848.1.S1_at	BQ578139	hypothetical protein LOC100276006	-	1e+0	At4g13955	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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