Gene omics information

Query gene ID	GmaAffx.80314.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	92.5	GmaAffx.80314.1.S1_at	BQ785560	-	-	6e-6	At2g44950	HUB1 (HISTONE MONO-UBIQUITINATION 1)	S.X.	H.G.	Please select
0.50	71.7	Gma.8059.1.S1_at	AW310669	-	-	2e+0	At4g40050	signal transducer	S.X.	H.G.	Please select
0.48	67.7	Gma.7026.2.S1_a_at	BG363077	-	-	1e-13	At1g28320	DEG15	S.X.	H.G.	Please select
0.47	66.6	GmaAffx.43424.1.S1_at	BU545525	-	-	1e-41	At5g03415	DPB	S.X.	H.G.	Please select
0.47	66.6	Gma.8135.1.S1_at	BE658039	GT-1	-	3e-36	At1g13450	DNA binding protein GT-1	S.X.	H.G.	Please select
0.45	63.9	GmaAffx.21378.1.S1_at	AI856773	-	-	2e-3	At5g04090	unknown protein	S.X.	H.G.	Please select
0.44	63.3	Gma.8673.1.S1_at	BE821944	-	-	3e-114	At1g51720	glutamate dehydrogenase, putative	S.X.	H.G.	Please select
0.42	59.3	GmaAffx.644.1.S1_at	BE659523	-	-	4e-60	At2g32980	unknown protein	S.X.	H.G.	Please select
0.40	57.1	GmaAffx.1301.18.S1_at	BI967226	-	-	5e-6	At1g22620	ATSAC1 (suppressor of actin 1)	S.X.	H.G.	Please select
0.39	54.5	Gma.13242.1.S1_at	CD396483	NAC domain protein	-	1e-5	At5g64060	anac103 (Arabidopsis NAC domain containing protein 103)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.6	97.7	GSM292192	53-1026.1A.R014P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293789	33_3058.2D.R9D1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294310	60_3154.2I.R9I2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM294651	24_2594.2M.R227P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292890	65_C202.1L.R9L1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292768	30_C198.1K.R9K3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294153	18_2376.2H.R110P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293718	53_2144.2C.R109P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293877	29_3084.2E.R9E2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293881	32_3074.2E.R9E1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e-1	36	PsAffx.psZS002xO13f_at	PsAffx.psZS002xO13f	-	-	4e+0	At1g64090	reticulon family protein (RTNLB3)	C.G.	S.X.	Please select
0.03	5e-1	36	GmaAffx.28465.1.S1_at	BU964450	-	-	2e-1	At5g10010	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	36	GmaAffx.19759.1.S1_at	BG154978	-	-	3e-1	At4g22105	SCRL26 (SCR-Like 26)	C.G.	S.X.	Please select
0.02	2e+0	34	GmaAffx.64032.1.S1_at	CD390751	-	-	5e-1	At5g02440	unknown protein	C.G.	S.X.	Please select
0.01	8e+0	32	PsAffx.C59000064_at	PsAffx.C59000064	-	-	1e-1	At1g63610	unknown protein	C.G.	S.X.	Please select
0.00	8e+0	32	PsAffx.C114000003_at	PsAffx.C114000003	-	-	6e-2	At4g02920	unknown protein	C.G.	S.X.	Please select
0.02	8e+0	32	HgAffx.6009.1.S1_at	CB826202	-	-	1e+0	At1g63245	CLE14 (CLAVATA3/ESR-RELATED 14)	C.G.	S.X.	Please select
0.03	8e+0	32	HgAffx.15455.1.S1_at	CB281539	-	-	3e-1	At3g16851	unknown protein	C.G.	S.X.	Please select
0.04	8e+0	32	GmaAffx.85061.1.S1_at	AI736767	-	-	5e-2	At1g04020	BARD1 (BREAST CANCER ASSOCIATED RING 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	6e-6	52	Arabidopsis thaliana	At2g44950	819104	HUB1 (HISTONE MONO-UBIQUITINATION 1)	The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e+0	32	Hordeum vulgare	HM14G18r_at	HM14G18r	-	-	8e+0	At4g21902	unknown protein	C.G.	S.X.	Please select
0.03	2e-1	38	Oryza sativa	Os10g0565600	AK103864.1	-	Lipoprotein, type 6 family protein	4e-4	At1g55255	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	3e-8	59	Populus trichocarpa	PtpAffx.162917.1.S1_at	BU881599	histone ubiquitination proteins group	-	3e-5	At2g44950	HUB1 (HISTONE MONO-UBIQUITINATION 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e+0	32	Triticum aestivum	Ta.11897.1.A1_at	BQ171011	-	-	1e+1	At5g16486	-	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1622732_at	CF372633	hypothetical protein LOC100247887	-	3e-10	At5g60460	sec61beta family protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	ZmAffx.467.1.A1_at	AI677406	calmodulin-like	-	1e-2	At3g43810	CAM7 (CALMODULIN 7)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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