Gene omics information

Query gene ID GmaAffx.79004.1.S1_at
Gene name MADS-box protein
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8091.5GmaAffx.79004.1.S1_atBU761215MADS-box protein-2e-17At4g18960AG (AGAMOUS)S.X.H.G.
0.5071.7GmaAffx.51641.1.A1_atBU544035--4e-1At5g44574unknown proteinS.X.H.G.
0.5071.7Gma.12528.1.A1_atCD390464--6e-1At1g49510emb1273 (embryo defective 1273)S.X.H.G.
0.4766.6GmaAffx.65736.1.S1_s_atCA935185--1e+0At4g39700heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedS.X.H.G.
0.3853.3Gma.4717.1.S1_atAW309856--1e-13At3g10600CAT7 (CATIONIC AMINO ACID TRANSPORTER 7)S.X.H.G.
0.3650.8Gma.1534.1.S1_a_atBU579344--4e-17At3g53140O-diphenol-O-methyl transferase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
204.4100.0GSM191081Soybean_Cotyledon_EN1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
172.0100.0GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
160.8100.0GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
151.9100.0GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
146.0100.0GSM182038Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
121.8100.0GSM182037Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
110.9100.0GSM191082Soybean_Cotyledon_EN2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
96.5100.0GSM147942Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
96.1100.0GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
86.8100.0GSM147943Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.231e-22107GmaAffx.7093.1.S1_atBM092487--3e-21At3g58780SHP1 (SHATTERPROOF 1)C.G.S.X.
0.164e-1375Gma.6760.1.S1_atBU544178--1e-42At4g09960STK (SEEDSTICK)C.G.S.X.
0.073e-756GmaAffx.41949.2.S1_s_atAW733646--4e-6At5g20240PI (PISTILLATA)C.G.S.X.
0.073e-756GmaAffx.41949.2.S1_atAW733646--4e-6At5g20240PI (PISTILLATA)C.G.S.X.
0.151e-654GmaAffx.70788.1.S1_atAI959798--8e-35At2g03710SEP4 (SEPALLATA 4)C.G.S.X.
0.081e-654GmaAffx.41949.3.S1_atBM732175--1e-8At5g20240PI (PISTILLATA)C.G.S.X.
0.085e-652Gma.16618.1.S1_atBE330897SOC1-4e-12At2g45660AGL20 (AGAMOUS-LIKE 20)C.G.S.X.
0.082e-550GmaAffx.9006.2.S1_atBG789532--2e-4At4g24540AGL24 (AGAMOUS-LIKE 24)C.G.S.X.
0.031e-344GmaAffx.52757.1.S1_atBQ785411MADS transcription factor-9e-40At1g24260SEP3 (SEPALLATA3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.242e-1789Arabidopsis thalianaAt4g18960827631AG (AGAMOUS)Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.---C.G.S.X.
0.208e-1579Hordeum vulgareContig11029_atContig11029--2e-10At2g42830SHP2 (SHATTERPROOF 2)C.G.S.X.
0.233e-859Oryza sativaOsAffx.4301.1.S1_at---0C.G.S.X.
0.367e-27121Populus trichocarpaPtpAffx.162863.1.S1_atBU882965hypothetical protein-1e-6At3g58780SHP1 (SHATTERPROOF 1)C.G.S.X.
0.201e-654Triticum aestivumTa.12700.1.S1_atAB084577.1MADS box transcription factor-3e-6At2g42830SHP2 (SHATTERPROOF 2)C.G.S.X.
0.272e-51200Vitis vinifera1619742_atAF265562.1MAD-box transcripion factor-2e-16At3g58780SHP1 (SHATTERPROOF 1)C.G.S.X.
0.192e-961Zea maysZm.14826.1.A1_atAJ430637.1m23 protein-2e-16At4g18960AG (AGAMOUS)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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