CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.76376.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 GmaAffx.76376.1.S1_s_at BE583802 - - 4e-2 At1g54050 17.4 kDa class III heat shock protein (HSP17.4-CIII) S.X. H.G.
0.35 48.6 PsAffx.psZG005xN22f_s_at PsAffx.psZG005xN22f - - 9e+0 At5g14602 unknown protein S.X. H.G.
0.19 23.7 PsAffx.C11000025_at PsAffx.C11000025 - - 5e-4 At4g32551 LUG (LEUNIG) S.X. H.G.
0.13 16.3 PsAffx.CL1178Contig1_at PsAffx.CL1178Contig1 - - 2e-2 At1g04445 zinc finger (C2H2 type) family protein S.X. H.G.
0.09 12.0 PsAffx.C86000041_at PsAffx.C86000041 - - 2e-1 At1g31330 PSAF (photosystem I subunit F) S.X. H.G.
0.02 4.5 PsAffx.C59000014_at PsAffx.C59000014 - - 1e-1 At5g53910 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
120.0 100.0 GSM292793 53_C197.1K.R9K3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
94.6 100.0 GSM292182 42_1001.1A.R001L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
80.2 100.0 GSM292923 95_1465.1L.R283L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
73.7 100.0 GSM292791 51_1403.1K.R250L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
65.0 100.0 GSM292902 76_C215.1L.R9L3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
56.6 99.9 GSM292838 18_C211.1L.SLL3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
51.0 99.9 GSM292845 24_1445.1L.R272L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
50.8 99.9 GSM292203 65-1001.1A.R001U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
38.0 99.9 GSM292906 7_C201.1L.R9L1L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
26.7 99.8 GSM292912 85_1467.1L.R284L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.61 0 684 PsAffx.CL1178Contig1_at PsAffx.CL1178Contig1 - - 2e-2 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.04 6e-2 38 GmaAffx.69756.1.S1_at BU083805 - - 6e-2 At1g62380 ACO2 (ACC OXIDASE 2) C.G. S.X.
0.01 2e-1 36 PsAffx.C299000009_at PsAffx.C299000009 - - 2e-3 At1g66620 seven in absentia (SINA) protein, putative C.G. S.X.
0.01 2e-1 36 PsAffx.C166000028_at PsAffx.C166000028 - - 1e+0 At1g18265 unknown protein C.G. S.X.
0.01 2e-1 36 PsAffx.C1000217_at PsAffx.C1000217 - - 2e+0 At4g16240 unknown protein C.G. S.X.
0.03 2e-1 36 GmaAffx.63050.1.S1_at AW458020 KNT1 - 2e-22 At1g62360 STM (SHOOT MERISTEMLESS) C.G. S.X.
0.04 2e-1 36 GmaAffx.3599.1.S1_at BG882001 - - 2e-8 At1g72190 oxidoreductase family protein C.G. S.X.
0.06 2e-1 36 GmaAffx.26985.1.S1_at BG042251 - - 1e-2 At5g53590 auxin-responsive family protein C.G. S.X.
0.02 2e-1 36 Gma.3852.1.S1_at CD399104 - - 8e-75 At5g27840 TOPP8 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 4e-2 38 Arabidopsis thaliana At1g54050 841843 17.4 kDa class III heat shock protein (HSP17.4-CIII) F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM - - - C.G. S.X.
0.05 2e-2 38 Hordeum vulgare Contig18553_at Contig18553 - - 3e-1 At1g22110 structural constituent of ribosome C.G. S.X.
0.05 1e+0 34 Oryza sativa OsAffx.12273.1.S1_at - - - 0 C.G. S.X.
0.04 2e-1 36 Populus trichocarpa PtpAffx.206502.1.S1_at pmrna12899 hypothetical protein - 2e-18 At2g25180 ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12) C.G. S.X.
0.05 1e-2 40 Triticum aestivum Ta.7522.3.S1_at CA727768 - - 1e+0 At5g41050 unknown protein C.G. S.X.
0.05 2e-1 34 Vitis vinifera 1621867_at CF516530 - - 5e-2 At5g66000 unknown protein C.G. S.X.
0.03 7e-2 36 Zea mays Zm.19097.1.A1_at CO519732 hypothetical protein LOC100216571 - 1e+0 At5g55240 caleosin-related family protein / embryo-specific protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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