CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.75978.2.S1_x_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 91.5 GmaAffx.75978.2.S1_x_at AI900126 - - 8e-1 At3g21420 oxidoreductase, 2OG-Fe(II) oxygenase family protein S.X. H.G.
0.91 98.6 GmaAffx.75978.2.S1_at AI900126 - - 8e-1 At3g21420 oxidoreductase, 2OG-Fe(II) oxygenase family protein S.X. H.G.
0.55 76.3 GmaAffx.91578.1.S1_x_at CF807303 - - 6e-74 At3g54190 - S.X. H.G.
0.36 50.8 GmaAffx.91578.1.S1_at CF807303 - - 6e-74 At3g54190 - S.X. H.G.
0.29 39.0 GmaAffx.75978.3.S1_s_at CA937876 - - 2e-35 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative S.X. H.G.
0.14 17.5 GmaAffx.75978.1.S1_at AW755994 - - 5e-18 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.5 99.3 GSM209591 mock_0hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.5 99.3 GSM293060 61_C034.1N.R9N3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4 99.2 GSM209594 resistant_12hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
9.0 99.2 GSM294059 17_3118.2G.R9G2P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.8 99.1 GSM294132 86_3112.2G.R9G1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.8 99.1 GSM294075 31_3126.2G.R9G3P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.7 99.0 GSM293911 5_2236.2E.R249P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1 98.8 GSM292969 47_C222.1M.R9M1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.8 98.7 GSM293877 29_3084.2E.R9E2P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.7 98.7 GSM292959 38_C232.1M.R9M3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.86 0 658 GmaAffx.75978.2.S1_at AI900126 - - 8e-1 At3g21420 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.61 4e-65 248 GmaAffx.75978.1.S1_at AW755994 - - 5e-18 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative C.G. S.X.
0.27 1e-34 147 GmaAffx.57988.1.S1_at AW186234 - - 2e-17 At1g77840 eukaryotic translation initiation factor 5, putative / eIF-5, putative C.G. S.X.
0.02 8e-2 38 Gma.3151.1.S1_a_at BI969607 - - 1e-36 At2g37660 binding / catalytic/ coenzyme binding C.G. S.X.
0.02 3e-1 36 PsAffx.C9000072_at PsAffx.C9000072 - - 2e+0 At4g19925 disease resistance protein (TIR class), putative C.G. S.X.
0.02 5e+0 32 PsAffx.C87000033_at PsAffx.C87000033 - - 1e+1 At5g51090 unknown protein C.G. S.X.
0.03 5e+0 32 PsAffx.C22000051_at PsAffx.C22000051 - - 2e+0 At5g06690 WCRKC1 (WCRKC THIOREDOXIN 1) C.G. S.X.
0.03 5e+0 32 HgAffx.6857.1.S1_at CB825354 - - 1e+0 At2g41342 unknown protein C.G. S.X.
0.02 5e+0 32 GmaAffx.9568.1.S1_at CD401482 - - 5e-1 At1g62530 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-1 34 Arabidopsis thaliana At3g21420 821696 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:metabolic process;C:cellular_component unknown;POBFM - - - C.G. S.X.
0.03 4e-1 34 Hordeum vulgare Contig22699_at Contig22699 - - 4e+0 At2g46690 auxin-responsive family protein C.G. S.X.
0.03 3e+1 30 Oryza sativa OsAffx.32242.1.A1_at - - - 0 C.G. S.X.
0.08 1e-3 44 Populus trichocarpa PtpAffx.50347.1.S1_at CX172783 hypothetical protein - 2e-21 At1g36730 eukaryotic translation initiation factor 5, putative / eIF-5, putative C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.37583.1.A1_at BJ272621 - - 3e-1 At5g16250 unknown protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1612806_at CA814605 - - 2e+0 At4g13195 CLE44 (CLAVATA3/ESR-RELATED 44) C.G. S.X.
0.04 2e-2 38 Zea mays Zm.3921.1.S1_at AY107577.1 hypothetical protein LOC100276097 - 2e+1 At4g18930 cyclic phosphodiesterase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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