Gene omics information

Query gene ID	GmaAffx.75395.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	80.7	GmaAffx.75395.1.S1_at	AW099354	-	-	4e-12	At2g03480	dehydration-responsive protein-related	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.87850.1.S1_at	BU080614	-	-	6e-14	At5g47020	glycine-rich protein	S.X.	H.G.	Please select
0.55	76.3	GmaAffx.43012.1.S1_at	AW733354	-	-	1e-8	At2g35110	GRL (GNARLED)	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.75246.1.S1_at	AW508335	-	-	2e-14	At1g60800	NIK3 (NSP-INTERACTING KINASE 3)	S.X.	H.G.	Please select
0.44	63.3	Gma.1155.1.S1_at	BE805343	-	-	6e-6	At1g13750	calcineurin-like phosphoesterase family protein	S.X.	H.G.	Please select
0.33	46.1	Gma.10928.2.S1_a_at	BF009414	-	-	3e-43	At5g62890	permease, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.6	98.9	GSM293879	30_2202.2E.R190P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.1	98.5	GSM293604	34_2072.2B.R303P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.8	98.4	GSM293799	42_2160.2D.R076P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM293594	25_2056.2B.R020P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM293735	69_2098.2C.R204P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.1	98.1	GSM294022	73_2244.2F.R060P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM293952	9_3078.2E.SLE1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8	97.9	GSM294707	70_2600.2M.R182P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8	97.9	GSM293310	91_1180.1P.R110P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8	97.9	GSM244922	6_CON.M3W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	GmaAffx.85134.1.S1_at	BI945727	-	-	7e-1	At1g03680	ATHM1	C.G.	S.X.	Please select
0.02	3e-1	36	Gma.10845.1.S1_s_at	CD398005	-	-	2e-4	At3g15360	TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)	C.G.	S.X.	Please select
0.04	1e+0	34	PsAffx.psZS014xE21f_at	PsAffx.psZS014xE21f	-	-	4e+0	At4g31700	RPS6 (RIBOSOMAL PROTEIN S6)	C.G.	S.X.	Please select
0.04	1e+0	34	GmaAffx.1889.1.S1_at	BU578146	-	-	2e-11	At1g21270	WAK2	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C41000018_at	PsAffx.C41000018	-	-	3e-1	At5g19172	-	C.G.	S.X.	Please select
0.04	5e+0	32	GmaAffx.91441.1.S1_at	CF807166	Aminoacyl peptidase	-	6e-1	At2g37430	zinc finger (C2H2 type) family protein (ZAT11)	C.G.	S.X.	Please select
0.03	5e+0	32	GmaAffx.90306.1.S1_at	CF806031	FAD-linked oxidoreductase 1	-	2e-2	At2g34790	MEE23 (MATERNAL EFFECT EMBRYO ARREST 23)	C.G.	S.X.	Please select
0.03	5e+0	32	GmaAffx.77687.1.S1_at	AW101963	-	-	1e-22	At1g11390	ABC1 family protein	C.G.	S.X.	Please select
0.02	5e+0	32	GmaAffx.74889.1.S1_at	CA851547	-	-	9e-12	At2g41690	AT-HSFB3	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.18	4e-12	71	Arabidopsis thaliana	At2g03480	814877	dehydration-responsive protein-related	F:unknown;P:unknown;C:mitochondrion;PBOAF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-1	36	Hordeum vulgare	Contig5266_at	Contig5266	-	-	2e-13	At5g19220	APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1)	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	Os02g0805700	AK073676.1	-	Conserved hypothetical protein	1e+0	At2g37195	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.24	5e-49	194	Populus trichocarpa	PtpAffx.207891.1.S1_at	pmrna15666	-	-	2e-45	At1g13860	dehydration-responsive protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e+0	32	Triticum aestivum	TaAffx.6767.1.S1_at	CA678142	-	-	4e+0	Atmg00920	-	C.G.	S.X.	Please select
0.04	9e-1	32	Vitis vinifera	1622545_at	CF373636	hypothetical protein LOC100266772	-	9e-10	At3g55605	mitochondrial glycoprotein family protein / MAM33 family protein	C.G.	S.X.	Please select
0.03	2e+1	28	Zea mays	ZmAffx.195.1.A1_at	AI668458	-	-	1e+1	At5g21005	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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