Gene omics information

Query gene ID	GmaAffx.74451.1.A1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.69	86.8	GmaAffx.74451.1.A1_at	BU548027	-	-	5e-9	At3g10410	scpl49 (serine carboxypeptidase-like 49)	S.X.	H.G.	Please select
0.63	82.9	Gma.8179.1.S1_at	CD413439	-	-	2e-19	At3g18860	transducin family protein / WD-40 repeat family protein	S.X.	H.G.	Please select
0.62	82.1	Gma.5810.2.S1_a_at	AI965339	-	-	2e-79	At3g26340	20S proteasome beta subunit E, putative	S.X.	H.G.	Please select
0.59	79.5	Gma.17905.2.S1_at	CD393233	-	-	8e-37	At4g01320	ATSTE24	S.X.	H.G.	Please select
0.59	79.5	GmaAffx.56409.1.S1_at	BU965321	-	-	1e-16	At1g08750	GPI-anchor transamidase, putative	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.8929.1.S1_at	BG551351	-	-	1e-24	At3g49100	signal recognition particle 9 kDa protein, putative / SRP9, putative	S.X.	H.G.	Please select
0.55	76.3	Gma.2892.1.S1_at	CD398484	-	-	3e-36	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	S.X.	H.G.	Please select
0.52	73.1	Gma.13142.2.S1_a_at	BF069870	-	-	2e-13	At5g15220	ribosomal protein L27 family protein	S.X.	H.G.	Please select
0.51	72.3	Gma.15124.1.S1_at	BU548348	-	-	1e-41	At1g27310	NTF2A (NUCLEAR TRANSPORT FACTOR 2A)	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.1729.2.S1_at	BG726769	-	-	2e-42	At4g35410	clathrin adaptor complex small chain family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.9	97.1	GSM170928	V2 Control, biological rep3	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
3.4	96.4	GSM209589	resistant_48hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.1	95.8	GSM209598	resistant_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.8	95.1	GSM293307	89_1202.1P.R124P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8	95.1	GSM293614	43_2066.2B.R129P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.7	94.8	GSM293608	38_2088.2B.R293P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.7	94.8	GSM293395	79_1567.1Q.R156L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.7	94.8	GSM293221	10_1541.1P.R051L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.7	94.8	GSM293615	44_2051.2B.R038L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM293601	31_2069.2B.R213L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.52	1e-133	476	Gma.9885.1.S1_s_at	BG508491	-	-	3e-6	At3g10410	scpl49 (serine carboxypeptidase-like 49)	C.G.	S.X.	Please select
0.20	4e-29	129	Gma.5127.1.S1_at	BE021594	-	-	3e-13	At3g45010	scpl48 (serine carboxypeptidase-like 48)	C.G.	S.X.	Please select
0.11	3e-26	119	Gma.4814.3.A1_at	AW309892	-	-	3e-10	At3g02530	chaperonin, putative	C.G.	S.X.	Please select
0.20	5e-16	85	Gma.9705.1.S1_s_at	CD394600	-	-	4e-20	At3g10410	scpl49 (serine carboxypeptidase-like 49)	C.G.	S.X.	Please select
0.01	4e-1	36	PsAffx.C120000032_at	PsAffx.C120000032	-	-	6e+0	At5g40790	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	36	GmaAffx.63834.1.S1_at	BQ612344	-	-	2e-6	At5g22980	scpl47 (serine carboxypeptidase-like 47)	C.G.	S.X.	Please select
0.03	2e+0	34	HgAffx.17286.1.S1_at	CB299500	-	-	4e+0	At3g13437	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.15983.2.S1_s_at	AW279540	-	-	7e-5	At3g11410	PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.15983.2.S1_at	AW279540	-	-	7e-5	At3g11410	PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	5e-9	61	Arabidopsis thaliana	At3g10410	820205	scpl49 (serine carboxypeptidase-like 49)	F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.14	2e-16	85	Hordeum vulgare	Contig4586_at	Contig4586	-	-	1e-6	At3g10410	scpl49 (serine carboxypeptidase-like 49)	C.G.	S.X.	Please select
0.15	4e-11	69	Oryza sativa	Os07g0479300	D17587.1	-	Serine carboxypeptidase-like (EC 3.4.16.-)(Fragment)	4e-6	At3g10410	scpl49 (serine carboxypeptidase-like 49)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.24	2e-61	236	Populus trichocarpa	Ptp.3641.1.S1_at	BP930817	hypothetical protein	-	1e-30	At3g10410	scpl49 (serine carboxypeptidase-like 49)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.20	3e-16	85	Triticum aestivum	Ta.28600.1.S1_a_at	BE443069	-	-	2e-9	At3g45010	scpl48 (serine carboxypeptidase-like 48)	C.G.	S.X.	Please select
0.21	3e-32	137	Vitis vinifera	1618311_at	CF204566.1	-	-	3e-11	At3g45010	scpl48 (serine carboxypeptidase-like 48)	C.G.	S.X.	Please select
0.21	2e-15	81	Zea mays	Zm.2038.1.S1_at	CO519681	hypothetical protein LOC100279929	-	4e-4	At3g45010	scpl48 (serine carboxypeptidase-like 48)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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