Gene omics information

Query gene ID	GmaAffx.74050.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	91.5	GmaAffx.74050.1.S1_at	BF596673	-	-	8e-1	At3g14670	unknown protein	S.X.	H.G.	Please select
0.91	98.6	GmaAffx.83317.1.S1_at	BG047261	-	-	2e+0	At4g33550	lipid binding	S.X.	H.G.	Please select
0.80	91.5	Gma.17244.1.A1_at	AW309515	-	-	9e-1	At3g24310	MYB305 (myb domain protein 305)	S.X.	H.G.	Please select
0.73	88.9	GmaAffx.83317.3.S1_at	BU081218	-	-	1e+0	At3g62940	OTU-like cysteine protease family protein	S.X.	H.G.	Please select
0.67	86.1	GmaAffx.83317.2.S1_at	BM271235	-	-	2e+0	At5g52200	unknown protein	S.X.	H.G.	Please select
0.25	32.6	GmaAffx.55979.1.A1_at	BQ740793	-	-	5e+0	At5g57391	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.0	99.6	GSM293892	42_2212.2E.R101P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
14.4	99.6	GSM294592	60_2550.2L.R159P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.8	99.5	GSM293879	30_2202.2E.R190P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.4	99.5	GSM292851	2_1450.1L.R275P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.9	99.4	GSM294629	94_2534.2L.R044P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.7	99.4	GSM294370	30_2440.2J.R135P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.7	99.4	GSM293432	22_1614.1R.R036P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.2	99.4	GSM294337	85_2404.2I.R102P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.1	99.4	GSM292811	6_1406.1K.R251P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.0	99.4	GSM293992	46_2258.2F.R277P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.56	2e-36	153	GmaAffx.83317.3.S1_at	BU081218	-	-	1e+0	At3g62940	OTU-like cysteine protease family protein	C.G.	S.X.	Please select
0.03	1e-3	44	GmaAffx.18686.1.S1_at	BU548864	-	-	5e-20	At1g31120	KUP10	C.G.	S.X.	Please select
0.04	5e-3	42	GmaAffx.83317.2.S1_at	BM271235	-	-	2e+0	At5g52200	unknown protein	C.G.	S.X.	Please select
0.01	7e-2	38	PsAffx.C204000031_at	PsAffx.C204000031	-	-	2e-1	At5g46350	WRKY8	C.G.	S.X.	Please select
0.03	7e-2	38	HgAffx.24253.1.S1_at	CB278852	-	-	4e-1	At1g02680	TAF13 (TBP-ASSOCIATED FACTOR 13)	C.G.	S.X.	Please select
0.05	3e-1	36	HgAffx.17572.1.S1_at	CB278392	-	-	3e+0	At2g36160	40S ribosomal protein S14 (RPS14A)	C.G.	S.X.	Please select
0.03	3e-1	36	GmaAffx.87477.1.S1_at	BU926281	-	-	9e-2	At3g24450	copper-binding family protein	C.G.	S.X.	Please select
0.04	3e-1	36	GmaAffx.59275.1.S1_at	BM092977	-	-	3e+0	At3g44950	glycine-rich protein	C.G.	S.X.	Please select
0.02	3e-1	36	Gma.15468.1.S1_at	BE800435	resistance protein LM6	-	4e-2	At5g45875	SCRL27 (SCR-Like 27)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-1	34	Arabidopsis thaliana	At3g14670	820695	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e+0	32	Hordeum vulgare	S0000800025C01F1_x_at	S0000800025C01F1	-	-	1e+1	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	C.G.	S.X.	Please select
0.05	2e+0	34	Oryza sativa	OsAffx.8762.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	7e-2	38	Populus trichocarpa	PtpAffx.129445.1.A1_at	CK095406	-	-	1e+1	At4g09000	14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e+0	32	Triticum aestivum	TaAffx.106461.1.S1_at	CA718517	-	-	7e+0	At1g10585	transcription factor	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1622848_at	CF568868	-	-	1e-12	At2g06255	ELF4-L3 (ELF4-Like 3)	C.G.	S.X.	Please select
0.05	4e-1	34	Zea mays	Zm.4028.2.S1_at	AI833951	-	-	8e-1	At2g22540	SVP (SHORT VEGETATIVE PHASE)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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