Gene omics information

Query gene ID	GmaAffx.73853.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.89	93.5	GmaAffx.73853.1.S1_at	BM177977	-	-	8e-3	At5g06730	peroxidase, putative	S.X.	H.G.	Please select
0.20	25.1	Gma.6617.1.S1_at	BQ629224	-	-	2e+0	At5g06190	unknown protein	S.X.	H.G.	Please select
0.14	17.5	GmaAffx.92608.1.S1_s_at	CF808333	-	-	8e-6	At2g37760	aldo/keto reductase family protein	S.X.	H.G.	Please select
0.11	14.2	Gma.1546.1.S1_a_at	AW348242	-	-	3e-6	At1g62660	beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar	S.X.	H.G.	Please select
0.10	13.0	GmaAffx.499.1.S1_at	BE058375	-	-	2e-4	At1g17950	MYB52 (MYB DOMAIN PROTEIN 52)	S.X.	H.G.	Please select
0.07	10.2	Gma.15775.1.S1_at	BU765934	-	-	2e-13	At3g53880	aldo/keto reductase family protein	S.X.	H.G.	Please select
0.03	5.8	GmaAffx.93522.1.S1_s_at	CF807271	-	-	2e-11	At1g15950	CCR1 (CINNAMOYL COA REDUCTASE 1)	S.X.	H.G.	Please select
0.03	5.8	GmaAffx.21313.1.S1_s_at	BE611932	bZIP transcription factor bZIP62	-	2e-4	At5g24800	BZIP9 (BASIC LEUCINE ZIPPER 9)	S.X.	H.G.	Please select
0.00	1.4	Gma.12531.1.S1_at	BG508441	-	-	4e-4	At3g25420	scpl21 (serine carboxypeptidase-like 21)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.5	99.6	GSM293608	38_2088.2B.R293P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.1	99.4	GSM293956	13_2286.2F.R031P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4	99.2	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.1	99.2	GSM292333	7_C085.1E.SLE3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.7	99.1	GSM292347	15_1210.1F.R129P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.5	99.1	GSM292492	9_1272.1G.R173P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.5	99.1	GSM294032	82_2281.2F.R224U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.2	99.0	GSM292396	71_C105.1F.SLF3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.1	99.0	GSM293595	26_2077.2B.R246U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.0	99.0	GSM294257	17_3149.2I.SLI1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.57	1e-141	504	GmaAffx.23327.1.S1_at	BI970492	-	-	7e-3	At2g38380	peroxidase 22 (PER22) (P22) (PRXEA) / basic peroxidase E	C.G.	S.X.	Please select
0.55	1e-85	317	Gma.5725.1.S1_at	BM886367	-	-	4e-1	At4g37530	peroxidase, putative	C.G.	S.X.	Please select
0.55	1e-85	317	Gma.5725.1.S1_s_at	BM886367	-	-	4e-1	At4g37530	peroxidase, putative	C.G.	S.X.	Please select
0.33	6e-63	242	GmaAffx.89697.1.A1_at	CK606333	-	-	9e-2	At1g44970	peroxidase, putative	C.G.	S.X.	Please select
0.38	6e-63	242	GmaAffx.89697.1.S1_s_at	CK606333	Peroxidase precursor (GMIPER1)	-	2e-5	At5g06720	peroxidase, putative	C.G.	S.X.	Please select
0.38	3e-58	226	Gma.16812.1.S1_x_at	AF007211.1	peroxidase, pathogen-induced	-	1e-2	At5g19890	peroxidase, putative	C.G.	S.X.	Please select
0.38	3e-58	226	Gma.16812.1.S1_s_at	AF007211.1	peroxidase, pathogen-induced	-	1e-2	At5g19890	peroxidase, putative	C.G.	S.X.	Please select
0.48	8e-56	218	GmaAffx.91141.1.S1_at	CF806866	-	-	1e-1	At5g66390	peroxidase 72 (PER72) (P72) (PRXR8)	C.G.	S.X.	Please select
0.51	3e-52	206	Gma.4471.1.A1_at	CF921756	-	-	5e+0	At5g51650	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	8e-3	42	Arabidopsis thaliana	At5g06730	830562	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plasma membrane;PFOBM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-6	54	Hordeum vulgare	Contig12070_at	Contig12070	-	-	1e-5	At1g68850	peroxidase, putative	C.G.	S.X.	Please select
0.05	9e-1	36	Oryza sativa	Os07g0676900	AK072862.1	-	Peroxidase (EC 1.11.1.7)	6e-4	At5g05340	peroxidase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.14	3e-9	63	Populus trichocarpa	PtpAffx.25548.1.S1_a_at	X97351.1	hypothetical protein	-	7e-7	At5g06720	peroxidase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e-1	36	Triticum aestivum	TaAffx.111002.1.S1_s_at	CA650033	-	-	4e-6	At1g80930	MIF4G domain-containing protein / MA3 domain-containing protein	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1608629_at	CD797519	-	-	4e-1	At1g53035	unknown protein	C.G.	S.X.	Please select
0.05	5e-8	57	Zea mays	Zm.405.1.A1_at	AF037034.2	hypothetical LOC541674	-	2e-1	At5g05340	peroxidase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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