CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.73647.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 GmaAffx.73647.1.S1_at BM271040 - - 3e+0 At4g24310 unknown protein S.X. H.G.
0.18 22.3 Gma.7527.1.A1_at BU548356 - - 1e-3 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) S.X. H.G.
0.05 8.0 GmaAffx.49431.1.S1_at AW597528 - - 1e-48 At1g13180 DIS1 (DISTORTED TRICHOMES 1) S.X. H.G.
0.04 7.0 GmaAffx.18742.1.S1_at BI970450 - - 5e-6 At3g59340 unknown protein S.X. H.G.
0.02 4.5 GmaAffx.91258.1.S1_s_at CF806983 - - 1e-15 At5g02280 synbindin, putative S.X. H.G.
0.01 3.4 GmaAffx.30041.1.S1_at AW185758 - - 8e-1 At1g72240 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.8 99.3 GSM292923 95_1465.1L.R283L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.4 99.1 GSM244841 24_VP9.M2W2.CEL, Experimental replicate 2 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
8.3 99.1 GSM293989 43_2246.2F.R272P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.6 98.9 GSM292304 51_1178.1E.R109P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.6 98.9 GSM292225 19_C028.1B.V7B2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.4 98.9 GSM293817 59_2149.2D.R295L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.4 98.9 GSM293622 50_2083.2B.R288L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3 98.9 GSM292851 2_1450.1L.R275P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3 98.9 GSM294369 2_2439.2J.R135L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.7 98.7 GSM294427 82_2447.2J.R119L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-3 44 Gma.17190.1.S1_at BQ628623 - - 8e-14 At2g39710 aspartyl protease family protein C.G. S.X.
0.03 5e-3 42 GmaAffx.38335.1.S1_at AW306565 - - 5e-1 At2g46840 - C.G. S.X.
0.04 3e-1 36 GmaAffx.667.1.S1_at BE658464 - - 3e+0 At2g38290 ATAMT2 (AMMONIUM TRANSPORTER 2) C.G. S.X.
0.03 1e+0 34 Gma.5380.2.S1_at BI967640 - - 2e-21 At1g80260 emb1427 (embryo defective 1427) C.G. S.X.
0.03 1e+0 34 Gma.13724.1.S1_at CD403850 - - 2e-3 At2g37510 RNA-binding protein, putative C.G. S.X.
0.03 5e+0 32 HgAffx.6211.1.A1_at CB826000 - - 4e+0 At4g32580 thioredoxin family protein C.G. S.X.
0.03 5e+0 32 HgAffx.6211.1.S1_at CK349203 - - 4e+0 At4g32580 thioredoxin family protein C.G. S.X.
0.04 5e+0 32 GmaAffx.81577.1.S1_at BG046412 - - 3e+0 At3g07920 translation initiation factor C.G. S.X.
0.03 5e+0 32 GmaAffx.64738.1.S1_at BM886784 - - 4e+0 At5g64040 PSAN C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Arabidopsis thaliana At4g24310 828534 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.04 6e+0 30 Hordeum vulgare HVSMEg0003O11r2_at HVSMEg0003O11r2 - - 2e-1 At4g24015 zinc finger (RING-H2 type) protein-related C.G. S.X.
0.03 4e-1 36 Oryza sativa OsAffx.6091.1.S1_at - - - 0 C.G. S.X.
0.04 5e+0 32 Populus trichocarpa PtpAffx.225189.1.S1_s_at pmrna44343 hypothetical protein - 1e-2 At5g48140 polygalacturonase, putative / pectinase, putative C.G. S.X.
0.04 1e+1 30 Triticum aestivum TaAffx.81790.1.S1_at CA681842 - - 4e+0 At5g52760 heavy-metal-associated domain-containing protein C.G. S.X.
0.04 4e+0 30 Vitis vinifera 1621636_s_at CF202035.1 hypothetical protein LOC100265903 - 8e-4 At2g47730 ATGSTF8 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8) C.G. S.X.
0.04 1e+0 32 Zea mays ZmAffx.544.1.A1_at AI712096 hypothetical protein LOC100277115 - 3e+0 At1g04800 glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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