Gene omics information

Query gene ID	GmaAffx.72063.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.72063.1.S1_at	AW102068	-	-	7e-5	At4g29780	unknown protein	S.X.	H.G.	Please select
0.77	90.3	GmaAffx.75438.1.S1_at	AW102270	-	-	5e-1	At1g18750	AGL65 (AGAMOUS-LIKE 65)	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.85640.1.S1_at	AW703774	-	-	1e+0	At5g57290	60S acidic ribosomal protein P3 (RPP3B)	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.87213.1.S1_at	AW598135	-	-	2e-1	At5g57880	unknown protein	S.X.	H.G.	Please select
0.42	59.3	GmaAffx.87535.1.S1_at	BE209451	-	-	6e-7	At2g30020	protein phosphatase 2C, putative / PP2C, putative	S.X.	H.G.	Please select
0.29	39.0	Gma.3586.1.S1_at	BE658205	-	-	2e-6	At2g01300	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
33.1	99.9	GSM292458	58_1257.1G.R164U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.9	99.9	GSM236910	Soybean_nonapicalmeristem	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
32.9	99.9	GSM292481	79_1257.1G.R164L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
29.4	99.8	GSM292422	25_1253.1G.R161U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
25.8	99.8	GSM292249	63_1047.1B.R027U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.6	99.8	GSM292296	42_C076.1E.R9E1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.1	99.8	GSM292273	18_1177.1E.R109U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.7	99.8	GSM292459	59_1282.1G.R179P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.2	99.8	GSM292246	60_1047.1B.R027L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
21.9	99.8	GSM292425	28_1271.1G.R173U_rerun, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.42	1e-71	270	Gma.772.1.S1_at	BE819852	-	-	4e+0	At4g29780	unknown protein	C.G.	S.X.	Please select
0.31	5e-47	188	GmaAffx.7751.1.S1_at	BE059367	-	-	8e-1	At1g01380	ETC1 (ENHANCER OF TRY AND CPC 1)	C.G.	S.X.	Please select
0.20	2e-9	63	GmaAffx.15586.1.S1_at	BG839271	-	-	7e-6	At5g12010	unknown protein	C.G.	S.X.	Please select
0.14	7e-9	61	GmaAffx.38825.1.A1_at	AI960423	-	-	8e-1	At5g27541		C.G.	S.X.	Please select
0.04	1e-1	38	GmaAffx.92828.1.S1_at	CF808553	-	-	2e-5	At1g11580	PMEPCRA (METHYLESTERASE PCR A)	C.G.	S.X.	Please select
0.02	4e-1	36	PsAffx.C74000059_at	PsAffx.C74000059	-	-	8e-1	At3g48460	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.02	2e+0	34	Gma.16707.2.S1_at	BI471295	-	-	1e-1	At3g06760	-	C.G.	S.X.	Please select
0.02	2e+0	34	Gma.16707.2.S1_a_at	BI471295	-	-	1e-1	At3g06760	-	C.G.	S.X.	Please select
0.02	2e+0	34	Gma.13509.1.S1_at	CD399549	-	-	3e-9	At1g62400	HT1 (high leaf temperature 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	7e-5	48	Arabidopsis thaliana	At4g29780	829100	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;MPF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	32	Hordeum vulgare	Contig7968_at	Contig7968	-	-	3e-1	At3g53980	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	OsAffx.4457.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.27	2e-21	103	Populus trichocarpa	PtpAffx.119343.2.A1_a_at	BP936124	hypothetical protein	-	4e-6	At4g29780	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	32	Triticum aestivum	TaAffx.32471.1.S1_at	CA594484	-	-	4e+0	At4g24730	calcineurin-like phosphoesterase family protein	C.G.	S.X.	Please select
0.19	7e-24	109	Vitis vinifera	1619478_at	CD004753	hypothetical protein LOC100247440	-	3e-9	At5g12010	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	34	Zea mays	Zm.5290.2.A1_at	CF040249	-	-	5e+0	At5g09240	transcriptional coactivator p15 (PC4) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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