Gene omics information

Query gene ID	GmaAffx.71907.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.46	65.5	GmaAffx.71907.1.S1_at	BQ252738	-	-	2e-2	At3g52370	FLA15 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15 PRECURSOR)	S.X.	H.G.	Please select
0.60	80.7	GmaAffx.24896.1.S1_at	CA936646	-	-	2e-5	At1g79420	unknown protein	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.78833.1.S1_at	AW831542	-	-	5e-6	At1g79420	unknown protein	S.X.	H.G.	Please select
0.32	43.7	GmaAffx.85910.1.S1_at	BF071366	-	-	3e-4	At2g47500	ATP binding / microtubule motor	S.X.	H.G.	Please select
0.25	32.6	GmaAffx.66680.2.S1_at	AW596038	-	-	1e+0	At3g28230	-	S.X.	H.G.	Please select
0.17	21.2	GmaAffx.23789.2.S1_at	BQ630519	-	-	6e-18	At1g16860	merozoite surface protein-related	S.X.	H.G.	Please select
0.16	19.7	GmaAffx.2745.1.S1_at	BF009213	-	-	5e-61	At5g61840	GUT1	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.4	99.6	GSM171694	32_V.L.M.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
11.2	99.4	GSM244916	4_SLO.I3U1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
11.2	99.4	GSM244808	17_SLO.M5W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
11.0	99.4	GSM171681	29_Z.L.M.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
10.6	99.3	GSM293461	49_C104.1R.SLR3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.4	99.3	GSM171710	6_V.L.M.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
10.4	99.3	GSM293879	30_2202.2E.R190P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.4	99.3	GSM244867	30_V71.I3U1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
10.3	99.3	GSM171604	11_Y.L.M.3, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
10.0	99.3	GSM292933	14_C230.1M.V7M3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.70	2e-114	412	GmaAffx.85340.1.S1_at	BQ080890	-	-	6e-14	At3g11700	FLA18 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 18 PRECURSOR)	C.G.	S.X.	Please select
0.10	3e-48	192	Gma.4440.1.S1_at	AI442853	-	-	1e-26	At3g11700	FLA18 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 18 PRECURSOR)	C.G.	S.X.	Please select
0.05	3e-8	59	GmaAffx.75219.1.S1_at	BE020773	-	-	4e-4	At2g35860	FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)	C.G.	S.X.	Please select
0.04	1e-1	38	Gma.6736.2.S1_at	BQ741925	-	-	3e+0	At4g28840	unknown protein	C.G.	S.X.	Please select
0.01	4e-1	36	PsAffx.C3000081_at	PsAffx.C3000081	-	-	2e+0	At1g63160	replication factor C 40 kDa, putative	C.G.	S.X.	Please select
0.01	4e-1	36	PsAffx.C11000022_at	PsAffx.C11000022	-	-	2e+0	At2g24090	ribosomal protein L35 family protein	C.G.	S.X.	Please select
0.03	4e-1	36	GmaAffx.87305.1.S1_at	BM954481	-	-	7e-9	At2g19570	CDA1 (CYTIDINE DEAMINASE 1)	C.G.	S.X.	Please select
0.03	4e-1	36	GmaAffx.73873.1.S1_at	BQ298926	-	-	2e+0	At5g57290	60S acidic ribosomal protein P3 (RPP3B)	C.G.	S.X.	Please select
0.02	4e-1	36	Gma.6333.2.S1_s_at	CD396361	-	-	1e-1	At2g47560	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	2e-2	40	Arabidopsis thaliana	At3g52370	824402	FLA15 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15 PRECURSOR)	F:unknown;P:cell adhesion;C:endomembrane system;BOMPFAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	2e-9	61	Hordeum vulgare	Contig5827_at	Contig5827	-	-	7e-4	At2g35860	FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)	C.G.	S.X.	Please select
0.10	7e-16	85	Oryza sativa	Os03g0788600	AK069046.1	-	Beta-Ig-H3/fasciclin domain containing protein	4e-6	At2g35860	FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.13	6e-3	42	Populus trichocarpa	PtpAffx.358.2.S1_at	CN521153	hypothetical protein	-	1e-10	At5g06390	FLA17 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	3e-1	36	Triticum aestivum	Ta.28834.2.S1_x_at	BJ211503	-	-	9e-1	At3g43833	unknown protein	C.G.	S.X.	Please select
0.19	3e-7	54	Vitis vinifera	1617165_at	CD721075	hypothetical protein LOC100254768	-	9e-24	At5g06390	FLA17 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR)	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.9302.1.A1_at	BM333543	hypothetical protein LOC100192520	-	4e-1	At2g44065	ribosomal protein L2 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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