Gene omics information

Query gene ID	GmaAffx.71902.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.94	99.2	GmaAffx.71902.1.S1_at	BE607717	-	-	3e-1	At5g58680	armadillo/beta-catenin repeat family protein	S.X.	H.G.	Please select
0.44	63.3	Gma.5720.2.S1_s_at	BG652626	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	S.X.	H.G.	Please select
0.37	51.7	Gma.1760.3.S1_at	BM893205	-	-	5e-1	At2g36295	unknown protein	S.X.	H.G.	Please select
0.37	51.7	GmaAffx.92182.1.S1_s_at	CF807907	-	-	9e-1	At1g69800	CBS domain-containing protein	S.X.	H.G.	Please select
0.36	50.8	Gma.8009.2.S1_at	BI424216	-	-	5e-31	At2g38610	KH domain-containing protein	S.X.	H.G.	Please select
0.35	48.6	GmaAffx.90152.1.S1_s_at	CF805877	guanine nucleotide regulatory protein	-	8e-144	At4g17170	RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)	S.X.	H.G.	Please select
0.34	47.2	Gma.5720.3.S1_s_at	AW760166	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	S.X.	H.G.	Please select
0.33	46.1	GmaAffx.12516.1.S1_at	AW277285	-	-	3e-4	At3g58460	ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)	S.X.	H.G.	Please select
0.32	43.7	GmaAffx.89525.1.S1_s_at	CK606517	-	-	3e-26	At2g39840	TOPP4	S.X.	H.G.	Please select
0.29	39.0	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.4	98.9	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8	95.1	GSM293090	89_C026.1N.SLN2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8	95.1	GSM171619	15_W.F.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
2.8	95.1	GSM293859	12_2234.2E.R077P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM294236	85_3128.2H.SLH1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM292583	13_1360.1I.R225P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM292892	67_1464.1L.R282P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM293867	1_2238.2E.R002P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM293051	53_C022.1N.SLN1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM294088	46_2332.2G.R279P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.42	8e-24	111	Gma.4792.2.S1_at	AW203826	-	-	1e-2	At1g21780	BTB/POZ domain-containing protein	C.G.	S.X.	Please select
0.37	2e-18	93	GmaAffx.92556.1.S1_at	CF808281	-	-	3e-1	At1g21780	BTB/POZ domain-containing protein	C.G.	S.X.	Please select
0.05	4e-1	36	GmaAffx.52457.1.S1_at	BG881339	-	-	3e-14	At1g11390	ABC1 family protein	C.G.	S.X.	Please select
0.04	2e+0	34	GmaAffx.8096.1.S1_at	AW156218	-	-	8e-1	At3g45990	actin-depolymerizing factor, putative	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.74533.1.S1_at	BU760600	-	-	6e-11	At5g64290	DIT2.1 (DICARBOXYLATE TRANSPORT 2.1)	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.10870.1.S1_at	CA800397	-	-	8e-1	At5g02440	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	34	Gma.864.1.S1_at	AW277540	-	-	1e-1	At5g53060	KH domain-containing protein	C.G.	S.X.	Please select
0.02	2e+0	34	Gma.730.1.S1_at	BE658796	-	-	5e-1	At5g27260	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	34	Gma.6894.1.S1_at	BE821316	-	-	6e-16	At1g54500	rubredoxin family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	Arabidopsis thaliana	At5g58680	835982	armadillo/beta-catenin repeat family protein	F:binding;P:biological_process unknown;C:cellular_component unknown;MPOFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	8e+0	30	Hordeum vulgare	HV10D22r_at	HV10D22r	-	-	3e+0	At4g19480	unknown protein	C.G.	S.X.	Please select
0.02	5e-1	36	Oryza sativa	Os09g0247700	AK059400.1	-	Conserved hypothetical protein	2e-7	At3g02260	BIG (BIG)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	2e-6	54	Populus trichocarpa	PtpAffx.85749.1.S1_at	AI162272	hypothetical protein	-	4e-13	At1g21780	BTB/POZ domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+1	30	Triticum aestivum	TaAffx.77746.1.S1_at	CA743361	-	-	1e-5	At5g16440	IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1615448_at	CF568935	-	-	1e-61	At5g59910	HTB4	C.G.	S.X.	Please select
0.02	7e+0	30	Zea mays	Zm.8415.1.A1_at	BM074035	hypothetical protein LOC100273138	-	3e-1	At1g60680	aldo/keto reductase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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