Gene omics information

Query gene ID	GmaAffx.71777.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.71777.1.S1_at	BE346992	-	-	9e-1	At5g04270	zinc ion binding	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.72331.1.S1_at	CA799261	-	-	5e-3	At3g12940	unknown protein	S.X.	H.G.	Please select
0.01	3.4	GmaAffx.44444.1.S1_at	BE347826	-	-	8e-1	At4g30380	EXLB2 (EXPANSIN-LIKE B2 PRECURSOR)	S.X.	H.G.	Please select
0.00	1.4	Gma.3754.2.S1_at	AW156404	-	-	4e-16	At3g18430	calcium-binding EF hand family protein	S.X.	H.G.	Please select
0.00	1.4	GmaAffx.3025.1.S1_at	BU549574	-	-	2e-24	At5g22370	QQT1 (QUATRE-QUART 1)	S.X.	H.G.	Please select
0.00	1.4	GmaAffx.33467.1.A1_at	BU550495	-	-	8e-11	At3g12940	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.8	99.4	GSM292178	34-1006.1A.R003P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.4	99.4	GSM292538	51_1300.1H.R189P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.3	99.4	GSM293735	69_2098.2C.R204P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.8	99.4	GSM294367	28_2466.2J.R186P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.6	99.3	GSM293836	76_2176.2D.R217P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.0	99.3	GSM294466	33_2504.2K.R281P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.1	99.2	GSM293733	67_2108.2C.R256P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.0	99.2	GSM292952	31_1528.1M.R317P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.9	99.2	GSM293923	70_2204.2E.R074P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.9	99.2	GSM293759	90_2122.2C.R003P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	2e-11	69	Gma.2275.1.S1_at	CD390888	-	-	4e-22	At5g64130	-	C.G.	S.X.	Please select
0.04	2e-2	40	GmaAffx.91570.1.A1_s_at	CF807732	-	-	4e-78	At1g71230	CSN5B (COP9-SIGNALOSOME 5B)	C.G.	S.X.	Please select
0.04	2e-2	40	GmaAffx.91570.1.S1_at	CF807295	-	-	4e-78	At1g71230	CSN5B (COP9-SIGNALOSOME 5B)	C.G.	S.X.	Please select
0.03	2e-2	40	Gma.2729.1.S1_at	AW396742	-	-	5e-60	At1g22920	CSN5A (COP9 SIGNALOSOME 5A)	C.G.	S.X.	Please select
0.05	8e-2	38	Gma.92.1.S1_at	BI944139	-	-	3e-3	At5g56780	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	Gma.17428.1.S1_s_at	BM307747	-	-	3e-1	At3g21055	PSBTN (photosystem II subunit T)	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C7000057_at	PsAffx.C7000057	-	-	5e-1	At2g14635	-	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C111000042_at	PsAffx.C111000042	-	-	1e+0	At4g32208	-	C.G.	S.X.	Please select
0.02	1e+0	34	GmaAffx.1738.1.S1_at	BE658810	-	-	5e-29	At1g43620	UDP-glucose:sterol glucosyltransferase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	9e-1	34	Arabidopsis thaliana	At5g04270	830306	zinc ion binding	F:zinc ion binding;P:biological_process unknown;C:endomembrane system;MOFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	32	Hordeum vulgare	Contig633_x_at	Contig633	-	-	1e-15	At2g40205	60S ribosomal protein L41 (RPL41C)	C.G.	S.X.	Please select
0.04	2e+0	34	Oryza sativa	OsAffx.5756.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e+0	32	Populus trichocarpa	PtpAffx.3359.1.S1_at	CK095178	-	-	3e+0	At5g44582	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	34	Triticum aestivum	Ta.22666.2.S1_at	CA693066	-	-	8e-1	At5g65830	leucine-rich repeat family protein	C.G.	S.X.	Please select
0.04	2e+1	28	Vitis vinifera	1619659_s_at	CF405842	pectate lyase PL1-like	-	2e-1	At4g26230	60S ribosomal protein L31 (RPL31B)	C.G.	S.X.	Please select
0.03	6e+0	30	Zea mays	ZmAffx.817.1.A1_at	AI770438	-	-	8e-1	At5g22710	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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