Gene omics information

Query gene ID GmaAffx.7093.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.7093.1.S1_atBM092487--3e-21At3g58780SHP1 (SHATTERPROOF 1)S.X.H.G.
0.8392.5Gma.11881.1.A1_atAW433203--3e+0At1g34047-S.X.H.G.
0.7790.3GmaAffx.7093.2.S1_atBU083586--1e+1At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.6786.1GmaAffx.55121.1.A1_atBI970422--7e-1At3g10990F-box family proteinS.X.H.G.
0.6786.1GmaAffx.52757.1.S1_atBQ785411MADS transcription factor-9e-40At1g24260SEP3 (SEPALLATA3)S.X.H.G.
0.6786.1Gma.6760.1.S1_atBU544178--1e-42At4g09960STK (SEEDSTICK)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
133.4100.0GSM201127Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
133.4100.0GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
132.3100.0GSM147948Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
130.2100.0GSM182041Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
113.0100.0GSM201121Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
112.9100.0GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
111.9100.0GSM184828Whole Seed at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
105.9100.0GSM191090Soybean_Cotyledon_OI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
92.8100.0GSM182045Laser capture microdissected (LCM) outer integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
92.5100.0GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.211e-39165GmaAffx.7093.2.S1_atBU083586--1e+1At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.132e-23111Gma.6760.1.S1_atBU544178--1e-42At4g09960STK (SEEDSTICK)C.G.S.X.
0.233e-22107GmaAffx.79004.1.S1_atBU761215MADS-box protein-2e-17At4g18960AG (AGAMOUS)C.G.S.X.
0.131e-1481Gma.11881.1.A1_atAW433203--3e+0At1g34047-C.G.S.X.
0.083e-344GmaAffx.70788.1.S1_atAI959798--8e-35At2g03710SEP4 (SEPALLATA 4)C.G.S.X.
0.012e-138PsAffx.C75000034_atPsAffx.C75000034--4e-1At1g61260unknown proteinC.G.S.X.
0.012e-138PsAffx.C22000025_atPsAffx.C22000025--1e-2At4g26110NAP1C.G.S.X.
0.072e-138GmaAffx.41949.3.S1_atBM732175--1e-8At5g20240PI (PISTILLATA)C.G.S.X.
0.022e-138Gma.2505.2.S1_x_atBU548684--2e-22At2g40300ATFER4 (ferritin 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.223e-21103Arabidopsis thalianaAt3g58780825047SHP1 (SHATTERPROOF 1)One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.---C.G.S.X.
0.111e-1273Hordeum vulgareContig3831_atContig3831--3e-15At4g18960AG (AGAMOUS)C.G.S.X.
0.172e-861Oryza sativaOs01g0201700AY553724.1-MADS box protein2e-10At4g18960AG (AGAMOUS)C.G.S.X.
0.164e-27123Populus trichocarpaPtpAffx.43839.1.S1_atDN501305hypothetical protein-3e-23At4g09960STK (SEEDSTICK)C.G.S.X.
0.099e-652Triticum aestivumTa.27776.1.S1_atBJ274612MADS-box transcription factor TaAGL2-3e-12At4g18960AG (AGAMOUS)C.G.S.X.
0.155e-23107Vitis vinifera1607973_atCB969561--7e-4At4g18960AG (AGAMOUS)C.G.S.X.
0.102e-1169Zea maysZm.134.1.S1_atU31521.1Zea AGAMOUS homolog2-5e-11At2g42830SHP2 (SHATTERPROOF 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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