Gene omics information

Query gene ID	GmaAffx.70783.1.S1_at
Gene name	sodium/proton antiporter
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.64	83.4	GmaAffx.70783.1.S1_at	BQ612167	sodium/proton antiporter	-	2e-17	At5g27150	NHX1 (NA+/H+ EXCHANGER)	S.X.	H.G.	Please select
0.80	91.5	GmaAffx.68425.1.S1_at	BI425905	-	-	1e-35	At3g57650	LPAT2	S.X.	H.G.	Please select
0.70	87.1	GmaAffx.58610.1.S1_at	BF066199	-	-	1e-2	At3g49430	SRp34a (Ser/Arg-rich protein 34a)	S.X.	H.G.	Please select
0.67	86.1	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	S.X.	H.G.	Please select
0.61	81.8	GmaAffx.55210.1.S1_at	BE804778	-	-	5e-1	At1g08650	PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)	S.X.	H.G.	Please select
0.58	78.8	GmaAffx.29121.1.S1_at	BU762958	-	-	1e+0	At4g17310	unknown protein	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.56889.1.S1_s_at	AW781023	-	-	3e-7	At3g59380	FTA (FARNESYLTRANSFERASE A)	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.43069.1.S1_at	AI494747	-	-	4e-7	At1g14570	UBX domain-containing protein	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.92182.1.S1_s_at	CF807907	-	-	9e-1	At1g69800	CBS domain-containing protein	S.X.	H.G.	Please select
0.50	71.7	Gma.5720.2.S1_a_at	BG652626	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.6	97.7	GSM293595	26_2077.2B.R246U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM293639	66_2084.2B.R288P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293307	89_1202.1P.R124P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293604	34_2072.2B.R303P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293586	18_2092.2B.R298P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293539	54_3007.2A.SLA2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293500	19_2008.2A.R283P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
3.1	95.8	GSM293324	14_C074.1Q.V7Q1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293877	29_3084.2E.R9E2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	4e-60	232	Gma.2120.1.S1_at	BU765153	sodium/proton antiporter	-	1e-23	At3g05030	NHX2 (SODIUM HYDROGEN EXCHANGER 2)	C.G.	S.X.	Please select
0.12	1e-1	38	GmaAffx.84895.1.S1_at	AW508702	-	-	1e-2	At5g55470	ATNHX3	C.G.	S.X.	Please select
0.01	4e-1	36	PsAffx.C180000007_at	PsAffx.C180000007	-	-	1e+0	At5g26930	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.67904.1.S1_at	BG154719	-	-	2e-14	At5g11880	diaminopimelate decarboxylase, putative / DAP carboxylase, putative	C.G.	S.X.	Please select
0.01	7e+0	32	PsAffx.C247000011_at	PsAffx.C247000011	-	-	1e+0	At5g47590	heat shock protein-related	C.G.	S.X.	Please select
0.01	7e+0	32	PsAffx.C16000039_at	PsAffx.C16000039	-	-	9e-2	At4g15010	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.01	7e+0	32	PsAffx.C114000056_at	PsAffx.C114000056	-	-	8e-4	At3g06400	CHR11 (CHROMATIN-REMODELING PROTEIN 11)	C.G.	S.X.	Please select
0.04	7e+0	32	GmaAffx.82387.1.A1_at	BI969766	-	-	3e+0	At5g06690	WCRKC1 (WCRKC THIOREDOXIN 1)	C.G.	S.X.	Please select
0.02	7e+0	32	GmaAffx.82432.1.S1_at	BF424485	-	-	2e-5	At2g17975	zinc finger (Ran-binding) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	2e-17	89	Arabidopsis thaliana	At5g27150	832773	NHX1 (NA+/H+ EXCHANGER)	Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	2e-4	46	Hordeum vulgare	Contig16875_at	Contig16875	vacuolar Na+/H+ antiporter	-	3e-15	At5g27150	NHX1 (NA+/H+ EXCHANGER)	C.G.	S.X.	Please select
0.19	8e-28	125	Oryza sativa	Os07g0666900	AY324877.1	-	Na/H antiporter Nhx1	7e-33	At3g05030	NHX2 (SODIUM HYDROGEN EXCHANGER 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.31	7e-46	184	Populus trichocarpa	PtpAffx.208502.1.S1_at	pmrna16880	sodium proton exchanger	-	4e-30	At5g27150	NHX1 (NA+/H+ EXCHANGER)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.13	4e-13	75	Triticum aestivum	Ta.2760.1.S1_at	AY040245.1	Na+/H+ antiporter	-	2e-11	At5g27150	NHX1 (NA+/H+ EXCHANGER)	C.G.	S.X.	Please select
0.15	9e-36	149	Vitis vinifera	1622021_at	CF209010	hypothetical protein LOC100259022	-	3e-61	At3g05030	NHX2 (SODIUM HYDROGEN EXCHANGER 2)	C.G.	S.X.	Please select
0.13	6e-7	54	Zea mays	Zm.14983.1.S1_at	AY270036.1	Na+/H+ antiporter NHX1	-	1e-14	At5g27150	NHX1 (NA+/H+ EXCHANGER)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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