CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.70659.1.A1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.39 54.5 GmaAffx.70659.1.A1_at AI495240 - - 6e-1 At1g19540 isoflavone reductase, putative S.X. H.G.
0.25 32.6 Gma.336.1.A1_at AW310815 - - 2e+0 At1g56420 unknown protein S.X. H.G.
0.20 25.1 GmaAffx.9310.1.A1_at BU550842 - - 5e+0 At4g23885 unknown protein S.X. H.G.
0.18 22.3 GmaAffx.91283.1.A1_at CF806794 - - 2e+0 At1g34245 - S.X. H.G.
0.13 16.3 GmaAffx.91283.1.A1_x_at CF806794 - - 2e+0 At1g34245 - S.X. H.G.
0.03 5.8 GmaAffx.21978.1.A1_at CA803009 - - 1e+1 Atcg00820 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.1 99.3 GSM293772 18_2164.2D.R027P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.7 98.7 GSM294489 54_3198.2K.R9K3P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.1 98.5 GSM171706 5_V.C.M.3, Experimental replicate V GSE7124 Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.9 98.5 GSM292852 30_1463.1L.R282L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.6 98.3 GSM294514 77_2502.2K.R025P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.5 98.3 GSM294444 13_2487.2K.R111U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4 98.2 GSM294434 89_2444.2J.R083P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3 98.2 GSM294443 12_2524.2K.R053P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2 98.1 GSM294471 38_2522.2K.R162P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2 98.1 GSM294430 85_2455.2J.R220U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.90 5e-175 613 GmaAffx.70659.1.S1_at AI495240 - - 6e-1 At1g19540 isoflavone reductase, putative C.G. S.X.
0.04 2e-1 36 Gma.13912.1.A1_at CD409837 - - 9e-1 Atcg00720 - C.G. S.X.
0.03 9e-1 34 Gma.17914.1.S1_at AI939068 - - 5e-25 At5g03415 DPB C.G. S.X.
0.04 9e-1 34 Gma.10949.2.S1_at CA853885 - - 3e-1 At3g49440 F-box family protein-related C.G. S.X.
0.01 4e+0 32 PsAffx.C142000032_at PsAffx.C142000032 - - 3e+0 At3g50410 OBP1 (OBF BINDING PROTEIN 1) C.G. S.X.
0.03 4e+0 32 GmaAffx.89168.1.A1_at CK605643 Glutathione S-transferase GST 10 - 5e-7 At1g17190 ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26) C.G. S.X.
0.05 4e+0 32 GmaAffx.40997.1.S1_at AW100769 - - 2e+0 At1g70680 caleosin-related family protein C.G. S.X.
0.05 4e+0 32 Gma.9411.1.S1_at CA802381 - - 1e+1 At5g59870 HTA6 C.G. S.X.
0.02 4e+0 32 Gma.2462.1.S1_at BU551356 - - 2e+0 At1g07620 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-1 34 Arabidopsis thaliana At1g19540 838541 isoflavone reductase, putative F:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:cellular_component unknown;BPFOVMA - - - C.G. S.X.
0.04 1e+0 32 Hordeum vulgare HVSMEn0023M22r2_at HVSMEn0023M22r2 - - 1e+0 At1g46408 AGL97 (AGAMOUS-LIKE 97) C.G. S.X.
0.03 5e+0 32 Oryza sativa Os08g0324200 AK107845.1 - Harpin-induced 1 domain containing protein 1e-1 At5g19875 unknown protein C.G. S.X.
0.04 2e-1 36 Populus trichocarpa PtpAffx.207130.1.S1_at pmrna14145 hypothetical protein - 9e-1 At4g32600 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.05 7e-1 34 Triticum aestivum Ta.7192.2.S1_at BJ281702 - - 7e-1 At1g76660 - C.G. S.X.
0.05 3e+0 30 Vitis vinifera 1622846_x_at CF202503.1 - - 2e+0 At5g59950 RNA and export factor-binding protein, putative C.G. S.X.
0.04 4e+0 30 Zea mays ZmAffx.566.1.A1_at AI714636 - - 2e-1 At5g05610 AL1 (ALFIN-LIKE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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