Gene omics information

Query gene ID GmaAffx.70374.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.70374.1.S1_atCA935398--3e-4At2g36985ROT4 (ROTUNDIFOLIA4)S.X.H.G.
0.2532.6GmaAffx.70526.1.A1_atCD404493--7e-1At5g53560CB5-E (CYTOCHROME B5 ISOFORM E)S.X.H.G.
0.035.8PsAffx.psZG005xN22f_s_atPsAffx.psZG005xN22f--9e+0At5g14602unknown proteinS.X.H.G.
0.013.4GmaAffx.75422.1.S1_atAW318210--1e-5At3g57400unknown proteinS.X.H.G.
0.013.4GmaAffx.84946.1.S1_s_atBM523917--6e-11At3g53950glyoxal oxidase-relatedS.X.H.G.
0.001.4GmaAffx.90612.1.S1_atCF806337--2e-14At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
243.1100.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
66.3100.0GSM236910Soybean_nonapicalmeristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
53.699.9GSM237070Soy_non-shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
43.399.9GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.499.8GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
22.699.8GSM24480717_CON.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
19.099.7GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.699.6GSM2449328_V71.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
15.399.6GSM170927Rust Innoculated, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
13.799.5GSM2921985_C008.1A.V7A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-136GmaAffx.36217.1.S1_atBG509307--3e+0At4g24015zinc finger (RING-H2 type) protein-relatedC.G.S.X.
0.011e+034PsAffx.C97000006_s_atPsAffx.C97000006--5e+0At5g28295unknown proteinC.G.S.X.
0.011e+034PsAffx.C5000167_atPsAffx.C5000167--2e-3At1g64630WNK10 (WITH NO LYSINE KINASE 10)C.G.S.X.
0.031e+034GmaAffx.4331.1.A1_atBG551366--1e+0At3g43970unknown proteinC.G.S.X.
0.016e+032PsAffx.C658000001_atPsAffx.C658000001--2e-2At1g47970unknown proteinC.G.S.X.
0.016e+032PsAffx.C658000001_s_atPsAffx.C658000001--2e-2At1g47970unknown proteinC.G.S.X.
0.016e+032PsAffx.C44000063_atPsAffx.C44000063--3e-1At3g04000short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.016e+032PsAffx.C3000075_s_atPsAffx.C3000075--3e-1At1g69660meprin and TRAF homology domain-containing protein / MATH domain-containing proteinC.G.S.X.
0.016e+032PsAffx.C3000075_atPsAffx.C3000075--3e-1At1g69660meprin and TRAF homology domain-containing protein / MATH domain-containing proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-446Arabidopsis thalianaAt2g369852745585ROT4 (ROTUNDIFOLIA4)Encodes ROTUNDIFOLIA4, a member of the seed plant-specific family of small peptides, RTFL (ROT FOUR LIKE), characterised by the presence of a 29-amino acid domain: RTF. Expressed in shoot apices, young leaves and flowers. Involved in controlling polarity-dependent cell proliferation.---C.G.S.X.
0.038e+030Hordeum vulgareContig24342_atContig24342--3e+0At3g26510octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinC.G.S.X.
0.022e+034Oryza sativaOs12g01577009640.m00533-Conserved hypothetical protein6e-1At4g26880stigma-specific Stig1 family proteinC.G.S.X.
0.039e-238Populus trichocarpaPtpAffx.36741.1.S1_atCK093908hypothetical protein-1e+0At5g06900CYP93D1C.G.S.X.
0.043e-136Triticum aestivumTaAffx.111061.1.S1_atCA648825--2e+0At3g52770ZPR3 (LITTLE ZIPPER 3)C.G.S.X.
0.033e-134Vitis vinifera1615111_atCD721525--2e-2At5g47790forkhead-associated domain-containing protein / FHA domain-containing proteinC.G.S.X.
0.037e+030Zea maysZmAffx.745.1.A1_atAI745776--3e+0At5g17650glycine/proline-rich proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage