Gene omics information

Query gene ID GmaAffx.69688.5.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.3GmaAffx.69688.5.S1_atBQ785367--9e-2At3g04570DNA-binding protein-relatedS.X.H.G.
0.5273.1GmaAffx.92834.1.S1_atCF808559--6e-6At5g28050cytidine/deoxycytidylate deaminase family proteinS.X.H.G.
0.5071.7Gma.6752.1.S1_atBU5447313-methylcrotonyl-CoA carboxylase, biotin-carrier domain-2e-51At1g03090MCCAS.X.H.G.
0.4867.7GmaAffx.85974.1.S1_atBF424274--7e-2At2g22170lipid-associated family proteinS.X.H.G.
0.4665.5GmaAffx.85356.1.S1_atCA938632--6e-5At3g61060AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13)S.X.H.G.
0.4665.5Gma.6433.1.S1_atBI970694acyl-CoA oxidase-2e-43At3g51840ACX4 (ACYL-COA OXIDASE 4)S.X.H.G.
0.3751.7Gma.2183.1.S1_atCD402949--3e-9At3g04520THA2 (Threonine Aldolase 2)S.X.H.G.
0.3548.6Gma.10907.1.S1_s_atCA851238--1e-5At4g27450unknown proteinS.X.H.G.
0.3243.7Gma.2313.2.S1_s_atBI700522hypothetical LOC547601-2e-35At4g27450unknown proteinS.X.H.G.
0.2735.7Gma.898.1.S1_atAJ010201.1inosine monophosphate dehydrogenase-5e-18At1g16350inosine-5'-monophosphate dehydrogenase, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.699.6GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
8.699.1GSM29258919_C160.1I.V7I3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.499.1GSM29257383_C128.1H.V7H1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.199.0GSM2946683_3218.2M.V7M1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.899.0GSM2926537_C156.1I.V7I2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.398.9GSM2938569_3060.2D.V7D1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.298.9GSM2928005_1436.1K.R267P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.298.9GSM29270451_C171.1J.V7J2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.898.7GSM29414510_3144.2H.V7H3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.698.7GSM29259626_C146.1I.V7I1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.482e-49196Gma.9131.1.A1_atCA818921--1e+0At2g36180calmodulin-related protein, putativeC.G.S.X.
0.031e-138PsAffx.CL2570Contig1_atPsAffx.CL2570Contig1--4e+0At5g09530hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.035e-136HgAffx.15812.1.S1_atCB374861--4e+0At4g33520PAA1 (P-TYPE ATP-ASE 1)C.G.S.X.
0.035e-136GmaAffx.93192.1.S1_s_atCF808917--5e+0At5g63087-C.G.S.X.
0.035e-136GmaAffx.93192.1.S1_atCF808917--5e+0At5g63087-C.G.S.X.
0.015e-136Gma.9633.1.S1_atAY170374.1NADPH:P450 reductase-1e-22At4g24520ATR1 (ARABIDOPSIS P450 REDUCTASE 1)C.G.S.X.
0.022e+034PsAffx.C30000011_atPsAffx.C30000011--1e+1At5g26890unknown proteinC.G.S.X.
0.032e+034HgAffx.13295.1.A1_atCB374687--9e-1At2g22050-C.G.S.X.
0.032e+034HgAffx.13295.1.S1_atCB374687--9e-1At2g22050-C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.069e-238Arabidopsis thalianaAt3g04570819613DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:unknown;BPMOFVA---C.G.S.X.
0.084e-238Hordeum vulgareContig23110_atContig23110--1e+0At4g38000Dof-type zinc finger domain-containing proteinC.G.S.X.
0.073e-344Oryza sativaOs08g0563200AK110263.1-Protein of unknown function DUF296 domaincontaining protein2e-1At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)C.G.S.X.
0.092e+034Populus trichocarpaPtpAffx.209324.1.S1_atpmrna18438hypothetical protein-3e-10At3g55560AGF2 (AT-hook protein of GA feedback 2)C.G.S.X.
0.044e-136Triticum aestivumTa.11823.1.A1_atBQ170873--6e-1At1g63940monodehydroascorbate reductase, putativeC.G.S.X.
0.036e+030Vitis vinifera1622712_s_atCD801320hypothetical protein LOC100267597-6e+0At2g13272unknown proteinC.G.S.X.
0.032e+032Zea maysZm.2361.1.A1_atBM381388hypothetical protein LOC100191552-3e-17At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage