Gene omics information

Query gene ID GmaAffx.69411.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.69411.1.S1_atBQ080393--5e-11At1g59870PEN3 (PENETRATION 3)S.X.H.G.
0.8091.5Gma.17345.1.S1_atBM732305--2e-25At1g59870PEN3 (PENETRATION 3)S.X.H.G.
0.8091.5GmaAffx.87803.1.S1_atBI321901--6e-9At3g16340PDR1S.X.H.G.
0.1316.3GmaAffx.92882.1.S1_atCF808607--1e+0At5g02750zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.0710.2Gma.633.2.S1_atBQ741155--3e-52At1g53570MAP3KAS.X.H.G.
0.069.0Gma.633.2.S1_x_atBQ741155--3e-52At1g53570MAP3KAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.198.1GSM209592resistant_6hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.098.0GSM29284928_1443.1L.R271U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.098.0GSM29365984_2078.2B.R246P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.998.0GSM29281573_C185.1K.SLK1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.597.7GSM29276629_C189.1K.SLK2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.597.7GSM29361342_2054.2B.R307P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.497.6GSM29360535_2091.2B.R298U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.297.4GSM2936547_2070.2B.R213P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.197.3GSM29358618_2092.2B.R298P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.197.3GSM29360434_2072.2B.R303P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.112e-136Gma.5574.2.S1_atBI893662--2e-21At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)C.G.S.X.
0.029e-134PsAffx.C34000109_s_atPsAffx.C34000109--3e+0At3g16565ATP binding / alanine-tRNA ligase/ nucleic acid binding / nucleotide bindingC.G.S.X.
0.029e-134PsAffx.C261000003_atPsAffx.C261000003--4e+0At3g09800protein bindingC.G.S.X.
0.039e-134PsAffx.C122000044_atPsAffx.C122000044--2e+0At3g55570unknown proteinC.G.S.X.
0.019e-134PsAffx.C11000086_atPsAffx.C11000086--2e-1At3g17370pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.039e-134HgAffx.15970.1.S1_atCB376148--6e+0At5g04238unknown proteinC.G.S.X.
0.029e-134Gma.7210.1.S1_atBE822041--3e-52At4g11960PGRL1B (PGR5-Like B)C.G.S.X.
0.049e-134Gma.4927.2.S1_atBM521060--2e-9At4g15236ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingC.G.S.X.
0.004e+032PsAffx.C70000008_atPsAffx.C70000008--8e-2At1g27340F-box family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.075e-1167Arabidopsis thalianaAt1g59870842281PEN3 (PENETRATION 3)ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid–dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.---C.G.S.X.
0.071e-1685Hordeum vulgareContig13986_atContig13986--4e-33At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)C.G.S.X.
0.192e-1583Oryza sativaOs06g0554800AK121182.1-ABC transporter (PDR5-like) isolog (PDR1 ABCtransporter)8e-34At3g16340PDR1C.G.S.X.
0.102e-26119Populus trichocarpaPtpAffx.202964.1.S1_atpmrna5868hypothetical protein-3e-52At1g59870PEN3 (PENETRATION 3)C.G.S.X.
0.178e-1373Triticum aestivumTaAffx.86413.1.S1_atCA608902--8e-14At3g16340PDR1C.G.S.X.
0.042e-134Vitis vinifera1608239_atCF372130hypothetical protein LOC100249651-6e-36At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)C.G.S.X.
0.041e+032Zea maysZm.17248.3.A1_a_atAW057073hypothetical protein LOC100280404-7e-11At5g37510EMB1467 (embryo defective 1467)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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