CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.67417.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.98 100.0 GmaAffx.67417.1.S1_at BE191495 - - 4e-1 At3g14610 CYP72A7 S.X. H.G.
0.63 82.9 GmaAffx.61034.2.S1_at BU964606 - - 9e-1 At1g48170 unknown protein S.X. H.G.
0.51 72.3 GmaAffx.69146.1.S1_at BE020450 - - 2e-2 At2g26000 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.47 66.6 Gma.1760.3.S1_at BM893205 - - 5e-1 At2g36295 unknown protein S.X. H.G.
0.46 65.5 GmaAffx.77370.1.S1_at BE210000 - - 8e-5 At1g05500 NTMC2T2.1 S.X. H.G.
0.45 63.9 GmaAffx.51194.1.S1_at BE347913 - - 4e-12 At2g47830 cation efflux family protein / metal tolerance protein, putative (MTPc1) S.X. H.G.
0.45 63.9 GmaAffx.90994.1.S1_s_at CF806719 - - 7e-12 At4g11410 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.43 60.6 GmaAffx.55210.1.S1_at BE804778 - - 5e-1 At1g08650 PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE) S.X. H.G.
0.43 60.6 GmaAffx.60396.1.S1_at AI900017 - - 6e-7 At3g52640 nicastrin-related S.X. H.G.
0.42 59.3 Gma.5562.3.S1_at AW830226 - - 9e-28 At2g47070 SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.3 98.2 GSM209591 mock_0hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.8 97.9 GSM292512 28_1284.1H.R180P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7 97.8 GSM170928 V2 Control, biological rep3 GSE7108 Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
4.4 97.6 GSM209590 susceptible_48hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.9 97.1 GSM170927 Rust Innoculated, biological rep2 GSE7108 Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
3.8 97.0 GSM292515 30_1290.1H.R183P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6 96.7 GSM293051 53_C022.1N.SLN1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6 96.7 GSM292851 2_1450.1L.R275P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5 96.6 GSM294268 23_2428.2I.R297P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5 96.6 GSM294230 7_2379.2H.R138U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.70 0 658 GmaAffx.25724.3.S1_at BE331279 - - 6e-2 At3g14680 CYP72A14 C.G. S.X.
0.57 5e-63 242 GmaAffx.67602.1.S1_at BM893161 - - 2e-2 At1g22890 unknown protein C.G. S.X.
0.62 4e-54 212 GmaAffx.78313.1.S1_at BM520482 - - 3e-1 At1g53760 unknown protein C.G. S.X.
0.41 3e-52 206 GmaAffx.55387.1.S1_at AW507640 - - 6e-3 At3g14640 CYP72A10 C.G. S.X.
0.07 4e-14 79 Gma.16927.1.S1_at BU547320 - - 5e-1 At3g14680 CYP72A14 C.G. S.X.
0.19 9e-9 61 GmaAffx.66744.1.S1_at AW703819 - - 1e-1 At1g53760 unknown protein C.G. S.X.
0.03 4e-2 40 GmaAffx.86730.1.S1_at BI469214 - - 2e-1 At5g64890 PROPEP2 (Elicitor peptide 2 precursor) C.G. S.X.
0.04 4e-2 40 GmaAffx.77177.1.S1_at BE023016 - - 5e-1 At2g20720 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.03 1e-1 38 GmaAffx.69337.1.S1_at BG154943 - - 2e-6 At5g60410 SIZ1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-1 36 Arabidopsis thaliana At3g14610 820689 CYP72A7 putative cytochrome P450 - - - C.G. S.X.
0.03 3e+0 32 Hordeum vulgare Contig26195_at Contig26195 - - 9e-1 At1g04250 AXR3 (AUXIN RESISTANT 3) C.G. S.X.
0.02 5e-2 40 Oryza sativa Os01g0627900 AB038597.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 9e-4 At1g17060 CYP72C1 (CYTOCHROME P450 72C1) C.G. S.X.
0.02 1e-1 38 Populus trichocarpa PtpAffx.17316.1.S1_at CK091483 hypothetical protein - 4e-20 At3g01990 ACR6 C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.78376.1.S1_at CA733223 - - 3e-1 At3g14650 CYP72A11 C.G. S.X.
0.05 3e-5 48 Vitis vinifera 1619578_at CB342051 hypothetical protein LOC100254366 /// hypothetical protein LOC100258319 /// hypothetical protein LOC100267392 - 6e-3 At3g14620 CYP72A8 C.G. S.X.
0.02 3e+0 32 Zea mays Zm.13292.1.S1_at CA826976 - - 2e-2 At5g19450 CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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