Gene omics information

Query gene ID	GmaAffx.67397.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	87.8	GmaAffx.67397.1.S1_at	AW186021	-	-	2e-11	At4g21680	proton-dependent oligopeptide transport (POT) family protein	S.X.	H.G.	Please select
0.91	98.6	Gma.874.1.A1_at	BE821656	-	-	4e+0	At4g01470	TIP1	S.X.	H.G.	Please select
0.80	91.5	GmaAffx.84670.1.S1_at	BU761213	-	-	3e-1	At2g42395	unknown protein	S.X.	H.G.	Please select
0.80	91.5	GmaAffx.84670.2.S1_at	AW278758	-	-	1e-7	At1g32450	NRT1.5 (NITRATE TRANSPORTER 1.5)	S.X.	H.G.	Please select
0.73	88.9	GmaAffx.17482.1.A1_at	BE821978	-	-	7e-1	At4g32780	phosphoinositide binding	S.X.	H.G.	Please select
0.23	29.9	GmaAffx.26859.1.S1_s_at	BM085620	-	-	3e-2	At1g78340	ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
91.4	100.0	GSM171720	8_Y.E.I.5, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
88.4	100.0	GSM171605	11_Z.E.I.5, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
57.1	99.9	GSM171703	4_W.E.I.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
54.8	99.9	GSM293763	9_3039.2C.R9C1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
42.1	99.9	GSM293248	35_1155.1P.R097L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
39.7	99.9	GSM294284	37_3153.2I.R9I2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
39.5	99.9	GSM171702	4_V.E.I.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
35.8	99.9	GSM293031	35_1055.1N.R032U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
35.1	99.9	GSM294169	32_3137.2H.R9H2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
33.5	99.9	GSM292191	51-C003.1A.R9A1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	GmaAffx.429.1.A1_at	BU547114	-	-	8e-2	At2g42240	nucleic acid binding / nucleotide binding	C.G.	S.X.	Please select
0.02	1e+0	34	Gma.10969.2.S1_at	CD402329	-	-	6e-2	At5g67050	lipase class 3 family protein	C.G.	S.X.	Please select
0.02	5e+0	32	PsAffx.CL401Contig1_at	PsAffx.CL401Contig1	-	-	6e-1	At4g30460	glycine-rich protein	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C72000032_at	PsAffx.C72000032	-	-	5e+0	At5g55430	unknown protein	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C61000069_at	PsAffx.C61000069	-	-	3e+0	At4g29283	LCR21 (Low-molecular-weight cysteine-rich 21)	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C35000058_at	PsAffx.C35000058	-	-	8e-1	At3g22400	LOX5	C.G.	S.X.	Please select
0.03	5e+0	32	HgAffx.24401.1.S1_at	AF193871	-	-	2e+0	At3g15390	SDE5 (silencing defective 5)	C.G.	S.X.	Please select
0.04	5e+0	32	GmaAffx.88672.1.A1_at	CD417045	-	-	5e-14	At4g02405	unknown protein	C.G.	S.X.	Please select
0.04	5e+0	32	GmaAffx.82425.1.S1_at	BI972661	-	-	2e-4	At3g21330	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	2e-11	69	Arabidopsis thaliana	At4g21680	828255	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	4e-1	34	Hordeum vulgare	Contig21934_at	Contig21934	-	-	2e+0	At3g48820	glycosyl transferase family 29 protein / sialyltransferase family protein	C.G.	S.X.	Please select
0.06	6e+0	32	Oryza sativa	OsAffx.4442.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.36	4e-34	145	Populus trichocarpa	PtpAffx.72779.1.S1_at	BU868403	-	-	7e-26	At4g21680	proton-dependent oligopeptide transport (POT) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e+0	32	Triticum aestivum	TaAffx.56812.2.S1_at	CA643716	-	-	4e-2	At3g07080	membrane protein	C.G.	S.X.	Please select
0.04	2e-1	34	Vitis vinifera	1614150_at	CF216054	-	-	1e+0	At2g28630	KCS12 (3-KETOACYL-COA SYNTHASE 12)	C.G.	S.X.	Please select
0.04	2e+1	28	Zea mays	ZmAffx.686.1.A1_at	AI737182	mTERF family protein	-	5e-2	At5g62380	ANAC101 (ARABIDOPSIS NAC-DOMAIN PROTEIN 101)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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