Gene omics information

Query gene ID GmaAffx.67157.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5374.2GmaAffx.67157.1.S1_atBE346592--3e-16At2g30950VAR2 (VARIEGATED 2)S.X.H.G.
0.8693.0GmaAffx.68071.1.S1_atBU091622--1e-1At1g09530PIF3 (PHYTOCHROME INTERACTING FACTOR 3)S.X.H.G.
0.8693.0GmaAffx.12286.2.S1_atBM108265--1e-11At5g38510rhomboid family proteinS.X.H.G.
0.7388.9GmaAffx.18273.1.A1_atBG839865--1e+0At1g64490unknown proteinS.X.H.G.
0.5678.2GmaAffx.12286.1.S1_atAW459370--1e+0At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)S.X.H.G.
0.4665.5Gma.13184.1.A1_atCD398024--2e-33At1g34000OHP2 (ONE-HELIX PROTEIN 2)S.X.H.G.
0.4463.3Gma.16015.1.S1_s_atCD411020--5e-34At2g05620PGR5 (proton gradient regulation 5)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
363.1100.0GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
206.3100.0GSM170924V2 Control, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
205.4100.0GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
202.8100.0GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
190.0100.0GSM170926Rust Innoculated, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
165.0100.0GSM170927Rust Innoculated, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
116.5100.0GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
108.0100.0GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
97.8100.0GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
97.2100.0GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.454e-87321Gma.11235.2.S1_atBM521714--4e-115At1g06430FTSH8C.G.S.X.
0.272e-61236Gma.1764.1.S1_atAW597827--4e-66At1g06430FTSH8C.G.S.X.
0.182e-21103Gma.11235.1.S1_s_atBQ298646--4e-57At2g30950VAR2 (VARIEGATED 2)C.G.S.X.
0.051e-138Gma.17881.1.S1_atBE659002--1e-61At1g09100RPT5B (26S proteasome AAA-ATPase subunit RPT5B)C.G.S.X.
0.012e+034PsAffx.C174000008_atPsAffx.C174000008--4e+0At2g40170GEA6 (LATE EMBRYOGENESIS ABUNDANT 6)C.G.S.X.
0.042e+034GmaAffx.20257.2.A1_atBG315707--3e+0At3g19690pathogenesis-related protein, putativeC.G.S.X.
0.042e+034Gma.7693.1.A1_atAW348250--7e-20At5g06360ribosomal protein S8e family proteinC.G.S.X.
0.042e+034Gma.7693.1.A1_a_atAW348250--7e-20At5g06360ribosomal protein S8e family proteinC.G.S.X.
0.016e+032PsAffx.C23000097_atPsAffx.C23000097--8e-1At5g24313unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.253e-1685Arabidopsis thalianaAt2g30950817646VAR2 (VARIEGATED 2)Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.---C.G.S.X.
0.185e-35147Hordeum vulgareContig2185_atContig2185--4e-99At1g06430FTSH8C.G.S.X.
0.222e-37157Oryza sativaOs06g0669400AK064913.1--4e-90At1g06430FTSH8C.G.S.X.
0.353e-63242Populus trichocarpaPtp.6060.1.S1_atDN490099hypothetical protein-9e-161At1g06430FTSH8C.G.S.X.
0.299e-2097Triticum aestivumTa.20597.1.S1_atCD491206--3e-55At1g06430FTSH8C.G.S.X.
0.258e-76282Vitis vinifera1610238_s_atCF404536hypothetical protein LOC100250511-0At1g06430FTSH8C.G.S.X.
0.322e-1891Zea maysZm.5805.2.A1_a_atAI649736filamentation temperature-sensitive H 2A /// filamentation temperature-sensitive H 2B-2e-56At1g06430FTSH8C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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